Acidiferrobacter sp. SPIII_3: C4901_03375
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Entry
C4901_03375 CDS
T05469
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii00300
Lysine biosynthesis
acii00550
Peptidoglycan biosynthesis
acii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4901_03375
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4901_03375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acii01011
]
C4901_03375
Enzymes [BR:
acii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C4901_03375
Peptidoglycan biosynthesis and degradation proteins [BR:
acii01011
]
Precursor biosynthesis
Amino acid ligase
C4901_03375
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PDEase_I_N
Motif
Other DBs
NCBI-ProteinID:
AWP22504
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Position
640061..641509
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AA seq
482 aa
AA seq
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MLATLLQGIRELPPDADRSIAALSLDSRTVVPDALFMALAGTSQDGRRFISDAVARGAAA
VVTEGLDDARLGTVPVIACPGLRHKVGVIADRFYGSPSRALSIIGVTGTNGKTTTSHLIA
HAMNIRSPCALIGTLGNGFPGALLPAERTTPDAISVHRWLDRFRREGAGAVSMEVSSHAL
DQGRVEGVRFMGAVFTNLTRDHLDYHGDMVRYGEAKARLFAWPDLAFAVLNGDDAFSEVL
KDRLPPGVRAWRYGSTGEVRIQDVQATARGLEIVLLAPEGPVTLKSPLIGHFNVYNLAAA
LTTLVASGWRARDAACALAAVTPIPGRMEPVPGRADQPFVVVDYAHTPDALEKALAGARA
HAVGRVICVFGCGGDRDRGKRALMGACASRYSDLAIVTHDNPRHEDPERIIADILKGVPD
EARAHLVVMGDRQAAIAHALREGSAGDVVVIAGKGHEEYQQFGDRRVPYSDRLTARQLLG
AP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctggccacgcttttgcagggcatccgcgaacttccgcccgatgccgatcggtcgatc
gcggccttgagcctcgacagtcgcacggtggtgccggatgccttgttcatggccctggct
ggcacgagtcaggatggacgccgtttcatcagcgatgccgtggcgcgcggcgcggccgcg
gtcgtgaccgagggtctggacgatgcccggttgggcacggtcccggtcatcgcctgtccc
ggcctgcgccataaggtcggtgtcattgccgaccgtttctatggaagcccgtcacgggca
ctgtcgatcattggagtgaccgggaccaacggtaagaccacgaccagtcatctcatagcc
catgccatgaacatccgcagtccatgcgccctgatcgggacgctcggtaacgggttcccc
ggtgccctgttgccggccgagcgcaccacaccggatgcgatatccgtgcatcgctggctg
gaccgcttccggcgcgagggggcgggcgcggtatcgatggaggtgtcctcgcatgcgctc
gaccagggccgggtcgagggggtgcgtttcatgggcgcggtctttacgaatctcacgcgc
gaccacctggattatcacggggacatggtgcgctacggggaggccaaggcgcggctgttc
gcctggcccgatctggcgttcgcggtcctgaacggcgacgatgcgtttagcgaggtcttg
aaggaccggttgccgcccggggttcgggcatggcgctacgggagcacgggtgaggtgcgc
attcaggacgtccaggcgaccgcgagaggcctcgagatcgtgttgctcgccccggaaggc
cccgtgaccctgaagagccccttgatcggccacttcaatgtctacaatctggcggcggcg
ctgaccacgctggtggcgtcgggctggcgggcgcgtgacgccgcctgtgccctggcggcc
gtgacccccatccccggacgcatggagcccgtgccggggcgcgccgatcagccgttcgtg
gtggtcgattatgcccacacccccgatgccctggagaaggccctggccggggcccgcgcc
cacgccgtggggcgcgtcatctgcgtttttggatgtggcggggaccgtgatcgcggaaag
cgcgcgctcatgggggcgtgcgccagccgttacagtgatctcgccatcgtgacccacgac
aatccccgccacgaggacccggagcgcatcattgccgacatcctgaaaggggtccccgac
gaggcccgcgcgcatctggtggtcatgggggatcgccaggcggcgatcgcgcacgcgcta
cgcgagggatccgcgggtgatgtcgtggtgatcgccggcaaggggcatgaggaatatcaa
cagttcggcgatcggcgggtcccatacagcgatcgcctcaccgcccgccagttgctgggg
gcgccatga
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