KEGG   PATHWAY: acio02010
Entry
acio02010                   Pathway                                
Name
ABC transporters - Acidovorax sp. 1608163
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
acio02010  ABC transporters
acio02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Acidovorax sp. 1608163 [GN:acio]
Gene
EAG14_00695  proV; proline/glycine betaine ABC transporter ATP-binding protein ProV [KO:K02000] [EC:7.6.2.9]
EAG14_00700  proW; proline/glycine betaine ABC transporter permease ProW [KO:K02001]
EAG14_00705  proX; proline/glycine betaine ABC transporter substrate-binding protein ProX [KO:K02002]
EAG14_01180  [KO:K01999]
EAG14_01190  [KO:K01998]
EAG14_01195  [KO:K01995]
EAG14_01200  [KO:K01996]
EAG14_01735  lptB; LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
EAG14_02065  [KO:K17324]
EAG14_02070  [KO:K17325]
EAG14_02075  [KO:K17322]
EAG14_02080  [KO:K17323]
EAG14_02090  [KO:K17321]
EAG14_02450  [KO:K01999]
EAG14_02515  [KO:K01999]
EAG14_03285  [KO:K10552]
EAG14_03290  [KO:K10553]
EAG14_03295  [KO:K10554]
EAG14_03565  [KO:K02072]
EAG14_03570  [KO:K02071]
EAG14_03575  [KO:K02073]
EAG14_03580  [KO:K02073]
EAG14_03695  [KO:K02065]
EAG14_03700  mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE [KO:K02066]
EAG14_03705  mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
EAG14_03715  [KO:K07323]
EAG14_03720  [KO:K07122]
EAG14_03795  yjfF; sugar ABC transporter permease YjfF [KO:K23509]
EAG14_03800  [KO:K23509]
EAG14_03805  [KO:K10820] [EC:7.5.2.9]
EAG14_03810  [KO:K10547]
EAG14_03815  [KO:K10548] [EC:7.5.2.-]
EAG14_03820  [KO:K10546]
EAG14_03825  [KO:K23508]
EAG14_03985  [KO:K15553]
EAG14_03990  [KO:K15554]
EAG14_03995  [KO:K15554]
EAG14_04000  [KO:K15555] [EC:7.6.2.14]
EAG14_04005  [KO:K15553]
EAG14_04035  [KO:K15553]
EAG14_04040  [KO:K15554]
EAG14_04045  [KO:K15555] [EC:7.6.2.14]
EAG14_04070  [KO:K15553]
EAG14_04115  [KO:K15553]
EAG14_04135  [KO:K15553]
EAG14_04155  [KO:K15552]
EAG14_04160  [KO:K10831] [EC:7.6.2.7]
EAG14_04165  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
EAG14_05885  [KO:K10227]
EAG14_05890  [KO:K10228]
EAG14_05895  [KO:K10229]
EAG14_05900  [KO:K10111] [EC:7.5.2.-]
EAG14_06250  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
EAG14_06255  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
EAG14_06260  pstA; phosphate ABC transporter permease PstA [KO:K02038]
EAG14_06265  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
EAG14_06355  [KO:K15553]
EAG14_06600  [KO:K02066]
EAG14_06605  [KO:K02067]
EAG14_06740  [KO:K13893]
EAG14_06745  [KO:K13894]
EAG14_06760  [KO:K13895]
EAG14_06815  [KO:K02044]
EAG14_07285  [KO:K01999]
EAG14_07290  [KO:K01997]
EAG14_07295  [KO:K01998]
EAG14_07300  [KO:K01995]
EAG14_07305  [KO:K01996]
EAG14_07460  [KO:K02012]
EAG14_07510  [KO:K01995]
EAG14_07515  [KO:K01996]
EAG14_07520  [KO:K01997]
EAG14_07525  [KO:K01998]
EAG14_07915  [KO:K01999]
EAG14_07920  [KO:K01997]
EAG14_07925  [KO:K01998]
EAG14_07930  [KO:K01995]
EAG14_07935  [KO:K01996]
EAG14_08725  [KO:K01999]
EAG14_09130  msbA; lipid A export permease/ATP-binding protein MsbA [KO:K11085] [EC:7.5.2.6]
EAG14_09225  [KO:K23536]
EAG14_09230  [KO:K23535]
EAG14_09235  [KO:K23537]
EAG14_09245  [KO:K07335]
EAG14_09400  lptG; LPS export ABC transporter permease LptG [KO:K11720]
EAG14_09405  lptF; LPS export ABC transporter permease LptF [KO:K07091]
EAG14_09425  [KO:K01999]
EAG14_09730  [KO:K23163]
EAG14_09740  [KO:K15553]
EAG14_09755  ssuC; aliphatic sulfonate ABC transporter permease SsuC [KO:K15554]
EAG14_09760  [KO:K15553]
EAG14_09765  [KO:K15555] [EC:7.6.2.14]
EAG14_11100  cysA; sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
EAG14_11105  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
EAG14_11110  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
EAG14_11115  [KO:K02048]
EAG14_11315  [KO:K02073]
EAG14_11335  [KO:K02072]
EAG14_11340  [KO:K02071]
EAG14_11705  [KO:K01996]
EAG14_11710  [KO:K01995]
EAG14_11715  [KO:K01998]
EAG14_11725  [KO:K01999]
EAG14_12435  [KO:K02020]
EAG14_12635  [KO:K01999]
EAG14_12680  [KO:K01999]
EAG14_12690  [KO:K15576]
EAG14_12695  ntrB; nitrate ABC transporter, permease protein [KO:K15577]
EAG14_12700  [KO:K15578] [EC:7.3.2.4]
EAG14_12865  [KO:K02073]
EAG14_13185  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
EAG14_13195  modC; molybdenum ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
EAG14_13220  [KO:K02020]
EAG14_13225  [KO:K05772]
EAG14_13230  [KO:K06857] [EC:7.3.2.6]
EAG14_13235  [KO:K05773]
EAG14_13780  [KO:K19340]
EAG14_13785  [KO:K19341]
EAG14_13825  [KO:K07335]
EAG14_13840  [KO:K07335]
EAG14_13845  [KO:K23536]
EAG14_13850  [KO:K23535]
EAG14_13855  [KO:K23537]
EAG14_14175  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
EAG14_14185  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
EAG14_14190  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
EAG14_14195  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
EAG14_14205  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
EAG14_14930  [KO:K01996]
EAG14_14935  [KO:K01995]
EAG14_14940  [KO:K01998]
EAG14_14945  [KO:K01997]
EAG14_15220  lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD [KO:K09810] [EC:7.6.2.-]
EAG14_15225  [KO:K09808]
EAG14_16190  [KO:K01998]
EAG14_16195  [KO:K01997]
EAG14_16200  [KO:K01999]
EAG14_16205  [KO:K01996]
EAG14_16210  [KO:K01995]
EAG14_16985  [KO:K02011]
EAG14_16990  [KO:K02010] [EC:7.2.2.7]
EAG14_17150  ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB [KO:K05813]
EAG14_17155  ugpA; sn-glycerol-3-phosphate ABC transporter permease UgpA [KO:K05814]
EAG14_17160  ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE [KO:K05815]
EAG14_17165  [KO:K05816] [EC:7.6.2.10]
EAG14_17755  [KO:K09691] [EC:7.5.2.14]
EAG14_17760  [KO:K09690]
EAG14_17880  [KO:K10112] [EC:7.5.2.-]
EAG14_17885  [KO:K17317]
EAG14_17900  [KO:K17315]
EAG14_18430  [KO:K10004] [EC:7.4.2.1]
EAG14_18435  [KO:K10002]
EAG14_18440  [KO:K10003]
EAG14_18445  [KO:K10001]
EAG14_18505  [KO:K24821]
EAG14_18650  [KO:K09691] [EC:7.5.2.14]
EAG14_18895  [KO:K10439]
EAG14_18900  [KO:K10441] [EC:7.5.2.7]
EAG14_18905  [KO:K10440]
EAG14_18920  [KO:K06726] [EC:5.4.99.62]
EAG14_19015  [KO:K15554]
EAG14_19020  [KO:K15555] [EC:7.6.2.14]
EAG14_19025  [KO:K15553]
EAG14_19030  [KO:K15553]
EAG14_19205  [KO:K09695]
EAG14_19215  [KO:K09694]
EAG14_19380  [KO:K01995]
EAG14_19385  [KO:K01997]
EAG14_19390  [KO:K01998]
EAG14_19395  [KO:K01999]
EAG14_19400  [KO:K01996]
EAG14_20350  [KO:K02067]
EAG14_20355  [KO:K02065]
EAG14_20360  [KO:K02066]
EAG14_20875  [KO:K01996]
EAG14_20880  [KO:K01995]
EAG14_20885  [KO:K01997 K01998]
EAG14_20890  [KO:K01999]
EAG14_20990  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
EAG14_20995  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
EAG14_21000  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
EAG14_21005  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
EAG14_21015  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
EAG14_21525  macB; MacB family efflux pump subunit [KO:K05685] [EC:7.6.2.-]
EAG14_21585  [KO:K23055]
EAG14_21590  [KO:K23056]
EAG14_21595  [KO:K23057]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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