Actinomadura citrea: OG979_19320
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Entry
OG979_19320 CDS
T09741
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
acir
Actinomadura citrea
Pathway
acir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OG979_19320 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acir03400
]
OG979_19320 (nth)
Enzymes [BR:
acir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OG979_19320 (nth)
DNA repair and recombination proteins [BR:
acir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OG979_19320 (nth)
Prokaryotic type
OG979_19320 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
WUR55999
LinkDB
All DBs
Position
4117276..4118016
Genome browser
AA seq
246 aa
AA seq
DB search
MATESTPKARARKWKDETRLGLVRRARRINRILAETYPDAHCELNFGTPFQLLVATVLSA
QTTDMRVNLTTPALFAKYPTPEDLAAADPEDVEAILKPTGFFRAKTKSVMGLSAALRDQF
DGEVPGRLEDLVKLPGVGRKTANVVLGNAFDVPGITVDTHFGRLARRFGWTAEDDPVKVE
EEIGALIPRKDWTMLSHRLIWHGRRICHARRPACGACPLARLCPSFGEGPVDEETARKLV
KPGPFS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagtcgaccccgaaggcgcgggctcgcaagtggaaggacgagacgcggctg
gggctggtgcggcgggcgcgccggatcaaccggatcctggccgagacctaccccgacgcg
cactgcgagctgaacttcggcaccccgttccagctcctggtcgcgaccgtgctgtcggcg
cagaccaccgacatgcgggtcaacctgaccacgcccgcgctgttcgccaagtaccccacc
cctgaggacctcgccgccgccgaccccgaggacgtcgaggcgatcctgaagcccaccggg
ttcttccgcgccaagaccaagtcggtcatgggcctgtcggccgcgctgcgcgaccagttc
gacggcgaggtccccggccgcctcgaagacctcgtcaagctgcccggcgtcgggcgcaag
acggccaacgtcgtcctgggcaacgcgttcgacgtccccggcatcaccgtcgacacccac
ttcggccgcctggcccggcgcttcggctggacggccgaagacgaccccgtgaaggtggaa
gaggagatcggcgccctcatcccgcgcaaggactggacgatgctgtcccacaggttgatc
tggcacggccgccggatctgccacgcgcgccgtcccgcctgcggggcgtgcccgctggcg
cggctgtgcccgtccttcggcgaggggccggtcgacgaggagacggcgcgcaagctcgtc
aagcccggaccgttctcgtga
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