Acholeplasma laidlawii: ACL_1348
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Entry
ACL_1348 CDS
T00659
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acl
Acholeplasma laidlawii
Pathway
acl03030
DNA replication
acl03410
Base excision repair
acl03420
Nucleotide excision repair
acl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACL_1348 (ligA)
03410 Base excision repair
ACL_1348 (ligA)
03420 Nucleotide excision repair
ACL_1348 (ligA)
03430 Mismatch repair
ACL_1348 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acl03032
]
ACL_1348 (ligA)
03400 DNA repair and recombination proteins [BR:
acl03400
]
ACL_1348 (ligA)
Enzymes [BR:
acl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACL_1348 (ligA)
DNA replication proteins [BR:
acl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACL_1348 (ligA)
DNA repair and recombination proteins [BR:
acl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACL_1348 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACL_1348 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACL_1348 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACL_1348 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
5_3_exonuc
TraF_2
Zn_ribbon_6
Zn_ribbon_Top1
CB_ParB_C
Auto_anti-p27
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
ABX81940
UniProt:
A9NHW0
LinkDB
All DBs
Position
complement(1407906..1409885)
Genome browser
AA seq
659 aa
AA seq
DB search
MDIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKK
IGGVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPNTSFTTELKIDGLAVTLI
YEKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSKPLDIEVRGEIYMSHKTFKEVNLE
RANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTVVGASNFNSTQKETLEFLSEL
GFPVNPHYKLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGYTAKYPKY
AGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNEDYILNKDI
RIDDQVLVHKAGEIIPEVIEVVLGSRTNQAPFEMVKHCPACESNLVRKQGEADYYCANDN
CPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKDQLEELPGFG
KKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLADAKYEDLIQI
PDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMTYKIDVVTTHPFNGKTFVVTGTLDDF
SRTEASDIIEKLGGKVSGSVSKKTDYVLAGKEAGSKLTKALELGIEVMDEATFKVKINE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacatacagactagaatcaaagagctaagaaaacaaatcaatgaagcaaactaccta
tatcatacaaaagatcaaccgattattagtgattttgtctatgatggattaatgcgtgaa
ttgattgaacttgaaactaaatatccagaatatgatgatgaaacatctccaactaaaaaa
attggtggtgttgttttagatgcctttaaaaagcatacacatacggtaccaatgatgagt
ttatctaatatctttaacaaagaagagttaaaggtcttttatgatagaattcaaaaagtt
ataccaaacactagttttacaacagagcttaaaatagatggtttagcagtaacgcttatt
tatgaaaaaggtatatttaaaaaggcagcgactcgtggtaatggtgtggtgggtgaagat
attactgaaaatgttaagaccattaaaaccttaccactacaattatctaaacctttagat
attgaagtacgtggtgaaatttatatgtctcataagacatttaaagaagtgaatttagaa
cgtgctaatagcaatctagatttatttgtaaatcctagaaatgcagcagccggtacagtc
agacaactagattctaaagtggttgctaaaagaaggttggatctctttacctacactgta
gtaggtgcaagtaattttaatagcacacaaaaagaaaccttagagtttttatcagaacta
ggttttccagtaaatcctcattataaacttgttgataatttagatgcattatcagatgct
attgataactatgacattttaagaaaaacattaccttatgatacagatggtgtagttatt
aaagtcaatcagtttgaacattatgaaacgattggttacacggctaaatatcctaagtat
gcaggcgcatataagtttgaggctgaaaaacaaattactaaagttgaagatattatcttt
caagtagggcgtactggtgtaattacaccggtggctgtattaacaccagtatttatatca
ggttctttagtatctagagctacactacataacgaagattatatattaaataaagacatt
cgaattgatgatcaagtattagttcataaagcaggtgaaattatacctgaggtgattgaa
gttgtactaggtagtagaaccaatcaagcaccatttgaaatggttaaacattgtccagcc
tgtgaatctaatttagttagaaaacaaggtgaagcagactattattgtgcaaatgataat
tgtccaggtaaaaatgtatttgggcttattcattttgcaagtagagctgctatggatatt
gatacattaggagaaaaagttgttgaactcttacatgaccaaacctatcttcaaaccata
ccagatatctataaattacatacctttaaagatcaattagaagaactacctggatttggt
aaaaagaaggtagaaaaactgcttaatgccattgaagcatctaagatgcaaaccttagat
agacttatctttggattgggtattaagaatgtaggtgccaaagtagctaaaacattatta
aatcattatccatccatcacgttattagctgatgcgaagtatgaggatttaattcaaata
cctgatattggtccagaaattgcagatagtgtaacaacttatttttctaatgaatcaaac
caacatatgttagaagaattaaaaaacttaggactacaaatgacttacaaaatagatgtt
gttacaacacatccatttaatggtaagacatttgttgttacaggtacgttagatgatttt
tcaagaactgaggcaagtgatatcattgaaaaattaggtggcaaggttagtggatctgtt
tctaaaaagacagattatgttttagcaggtaaagaggctggttctaaactgaccaaagca
ttagaactgggtatagaagttatggatgaggctacattcaaggtgaagattaatgaataa
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