Alterisphingorhabdus coralli: RB602_05385
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Entry
RB602_05385 CDS
T10589
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
acoa Alterisphingorhabdus coralli
Pathway
acoa00300
Lysine biosynthesis
acoa00550
Peptidoglycan biosynthesis
acoa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB602_05385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB602_05385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acoa01011
]
RB602_05385
Enzymes [BR:
acoa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RB602_05385
Peptidoglycan biosynthesis and degradation proteins [BR:
acoa01011
]
Precursor biosynthesis
Amino acid ligase
RB602_05385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
WOE76148
UniProt:
A0AA97FAH1
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All DBs
Position
1157821..1159275
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AA seq
484 aa
AA seq
DB search
MRLGSIFSAVPATLADQPVTGFAIDHRKVAPGTVFGAFRGARFNGEDFIADAVEAGAIAV
VASDQADVPSSVAHIVDDEPRRAFAQGAARYFRPVPSTVAAVTGTNGKTSTAEMTRQLWH
MAGFGAASIGTLGVTTSFDQNRTGLTTPDIVTFLNNMSGMARQGISHVIFEASSHGLSQF
RTEGLPVKIAAFTNFSRDHLDYHGTMEAYFAAKMRLFDEVVDSDGTAVIWADDPKSLEVQ
ERCETRGLKTLSVGEAGDDIVLVSRTPTPLGQVLMVEHQGKTYRISLPLIGAYQAANALT
SAGIAIAAGDEADQVFDHVARLQPVRGRLERAVIASNGAPVYVDYAHTPDALASAISALR
PHVTGKLICVFGAGGDRDSGKRPEMGKIAQAHADHVIVTDDNPRGEDPSAIRAEILAAAP
DAEDIGDRRSAIAHALSMAGSEDIVLLAGKGHEQGQIIGRGEDQRVLPFDDVEVARQVAG
EAVA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcggttccatcttttctgcagtgcccgccaccttggccgatcagccggtgaca
ggtttcgcgattgaccaccgcaaggttgctcccggcacggtattcggcgcctttcgcggt
gcgcgcttcaatggcgaggattttattgcggatgcggtagaagcaggcgcgattgctgtg
gttgcttccgatcaggccgatgtcccgtccagcgtcgcccatattgtcgatgacgaaccc
cgccgcgccttcgcgcaaggggccgcgcgctatttccgcccggtgccttcgactgttgct
gcggtgacgggaaccaatggcaagacctcgactgccgagatgacccgccagctctggcat
atggcgggctttggcgcggcgtcgattggtacgctgggggtcaccacctcttttgaccag
aaccgcaccggtcttaccacgccggatattgttactttcctcaacaatatgagtggcatg
gcgcgtcaagggatcagccatgtgatctttgaggcgtccagtcacggcctgtcgcaattc
cgcactgaaggtctgccggtaaagatcgctgccttcaccaatttcagccgcgaccatctc
gactatcatggcacgatggaggcttatttcgcggccaagatgcggttgtttgacgaggta
gtggatagcgatggcaccgccgtcatctgggccgatgatcccaaatcgctcgaagttcag
gagcgctgtgagacgcgtggtctcaagacgctgagcgtgggtgaggcgggtgatgatatc
gtgctggtctcacgcacaccaacgccactggggcaggtgctgatggtcgagcatcagggc
aaaacctatcgtatctcactgccgttgatcggcgcgtatcaggcggccaacgcgctcacc
tctgcaggcatagcgatcgccgcgggcgacgaagctgatcaggtctttgaccacgtcgcg
cggctgcaaccggtgcgcggacgtcttgagcgcgccgtgatcgccagcaatggcgcaccg
gtctatgtggattatgctcatacgcccgatgcgctggcctcggcgatatcggcgctgcgt
ccgcatgttaccggaaagctgatctgtgtttttggcgcaggtggggatcgtgatagcggc
aagcgtccggaaatgggcaagatcgcacaggcccatgccgatcatgtgatcgtcaccgat
gacaatccgcgcggcgaagatccgtcagcgatccgcgccgagatactcgcagcagcgcca
gatgcagaggatattggcgaccgccgttcagcgattgcccatgcgctttccatggcgggt
tctgaggatatcgtgctgcttgccggcaagggccatgagcagggccagattatcggacgt
ggtgaagatcagcgggtgctgccctttgatgatgtcgaggttgcgcggcaagtcgccggg
gaggcggtggcatga
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