Candidatus Andeanibacterium colombiense: P0Y56_05800
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Entry
P0Y56_05800 CDS
T09799
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob01501
beta-Lactam resistance
acob01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
P0Y56_05800
01503 Cationic antimicrobial peptide (CAMP) resistance
P0Y56_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acob03036
]
P0Y56_05800
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acob02000
]
P0Y56_05800
01504 Antimicrobial resistance genes [BR:
acob01504
]
P0Y56_05800
Chromosome and associated proteins [BR:
acob03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
P0Y56_05800
Transporters [BR:
acob02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
P0Y56_05800
Antimicrobial resistance genes [BR:
acob01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
P0Y56_05800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
HH_CzcB
BSH_CusB
Beta-barrel_RND_2
CzcB_C
HH_EMRA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
WEK47808
LinkDB
All DBs
Position
1158898..1160085
Genome browser
AA seq
395 aa
AA seq
DB search
MLNLRAAALVGLSSVALALAGCSGASKQHDRGPPTVGYVVVAPSAVPIPVSLGGRIVAVE
TSEVRPQVSGIIQRRLFTEGSVVRAGQPLYQIDPSLYRASTQQAQANLAAARASAEAARA
KANRYKPLADQQAIALQDYTDAEATARQAEAAVAQASAALETTRINLRFATVTAPISGRI
GRSLVTTGALASASQADPLAVIQRLDTVYVDMQQSSADLTALRQQMSKGQVTAGSTSVKL
QMEDGSTYPLPGVVEFSEISVNESTGTVTLRARFPNPNGLLLPGSFVTAVFDQAVEPQAY
LVPQAALQRDFDGSAFVYTVGADNKAKRRKVTAARTNGANWVVTDGLQRGDKVITQGLGS
NIRQNSEVKPVLASTPQRIGAPKGAGGGKAGGKAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatttgcgcgccgccgcgcttgtcggattatcttccgtcgccctcgcgctggcc
gggtgctccggcgctagcaagcagcacgaccgcgggcccccaacggtcgggtatgtcgtc
gtggccccttcggccgtgccgatcccggtctcgctcggcgggcgcatcgtcgccgtagaa
accagcgaggttcgcccccaggtaagcgggatcatccagcgccggctgtttaccgaaggt
agcgtcgtccgcgcgggccagccgctttaccagatcgacccgagcctctatcgcgcttcg
acccagcaggcgcaggccaacctcgccgctgcccgcgcgagcgccgaagccgcccgcgcc
aaggccaaccggtacaagccactggccgaccagcaggcgatcgcgctgcaggattacacc
gacgccgaggcgaccgcgcgacaggccgaagcggccgttgcgcaggcttccgccgcgctc
gagacgacccgcatcaatctgcgcttcgccacggtaaccgccccgatcagcgggcggatc
gggcgttcgctggtgaccaccggcgccctcgccagcgccagccaggccgatccgctggcg
gtgatccagcggctcgacacggtctatgtcgacatgcagcagtcgagcgccgacctgact
gcgctgcgccagcaaatgtccaagggccaggtcacggccggcagcaccagcgtgaagttg
cagatggaagatggcagcacctatccgctgccgggcgtcgtcgaattctccgaaatctcg
gtcaacgaaagcaccggcacggtaaccctgcgcgcacgcttcccgaaccccaacgggctg
ctgcttccgggcagcttcgtgaccgcggtgttcgatcaggcggtcgaaccgcaggcctat
ctcgtgccgcaggcggcgttgcagcgcgatttcgacggttcggccttcgtttacacggtc
ggcgccgacaacaaggccaagcgccgcaaggtcaccgccgcgcgcaccaatggcgcgaat
tgggtcgtcaccgatggcctgcagcgcggcgacaaggtgatcacgcagggcctgggcagc
aacattcgccagaacagcgaggtcaaacccgtgctggcgagtacaccgcagcggatcgga
gccccgaagggggccggtgggggcaaggccggcggaaaggcgggatag
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