KEGG   Atta colombica: 108686307
Entry
108686307         CDS       T11098                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
acoc  Atta colombica
Pathway
acoc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108686307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:acoc03000]
    108686307
   04121 Ubiquitin system [BR:acoc04121]
    108686307
   03036 Chromosome and associated proteins [BR:acoc03036]
    108686307
Enzymes [BR:acoc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     108686307
Transcription factors [BR:acoc03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    108686307
Ubiquitin system [BR:acoc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108686307
Chromosome and associated proteins [BR:acoc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108686307
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108686307
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like LRR_4 JHD F-box JmjC Cupin_8 LRR_Zer-1 LRR_FBXL18 PHD LRR_6 Rubredoxin LRR_14 LRR_EndoS LRR_8
Other DBs
NCBI-GeneID: 108686307
NCBI-ProteinID: XP_018047041
LinkDB
Position
Unknown
AA seq 980 aa
MSAMADDSAPLPKRRQLRERTRKLYTDDWTIGDEEIEGRRTFQLDEKIEAKRYDLSNFSG
LFREMTGPELNLTYLQKHGLQIPLLFRDKSGLGLRVPSSNFSVNDVRTCVGSKRVLDVMD
VNTQKNEDMTMKEWQKYYEDPNKERLLNVISLEFSHTKLENYVQSPALVRQVDWVDVVWP
RHLKESQVESTNLLEDMMYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHILHGGKIFWLI
PPTEKNLTLYQEWVLSGKQSDVFFGDMVDKCGRISLTAGMTLFIPTGWIHAVYTPQDSLV
FGGNFLHSFGIEMQLKVAQVEEHTKVPQKFRYPFFTEMLWYVLERYVHVLLGRSHLDISE
SQRQHLVPQHHQHVHVTDFELHGLKSIVMYLHSLPSTKKNVPELMRDPVALIHDVRCLVE
QHRHDNPEAAVTGNPVLPPPPPLTIVDRERLRVVRKGFVKSQRHHSDKSERAFPRRRRTR
CKKCEACTRQDCRECVFCQDMVKFGGSGRAKQTCLMRQCLRPMLPVTSSCKVCRLDGWKQ
PPAPLTGKSFPTTPSTLMECSICFDIVHPECIGLNSKEITVNDDLPNSWECPECFERGRN
LDCRPRHARGRTRKLSISSAASSAPTTDSERAMTPSKQSRLDPNDAWNDSPGEPAEGEQR
MTQQRTQLAMQLIASSSRSLVRPHVVVRPAPPPPIQETDGENEQNLVYNKTAVLAIFRFL
SIKDLLNCALVCRTWARYSTDFSLWKKLDMSHYSLRSVHLTVIVRRQPECLLLDWTNINK
MQLAWLLERLPQLRTLSLQGCTWAGVRALKRCSCPPLEKLNLSYVTSLNDTVLQEILDSP
TDSRPGIIDKTSRLKHLKNLSLAGCDLTDRGVRYIVQQLSDLETLDLSSIGRLTDSGVAH
LTSLSNLASLNLANCKLLTETTLDHLAKCKALKRLDLRHTTQVSTQAVIKFAAKSEHNLH
VTDVKLVEEKKKVKTDFMDT
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgtccgcaatggccgacgactccgcaccgctgccaaagaggcgccaattgcgcgagcga
accaggaagttgtatacggacgactggaccataggtgatgaagaaattgagggtcgcagg
acctttcaacttgatgagaagattgaggccaagaggtatgacctgagcaacttcagtggc
ctctttcgtgagatgaccgggccggagctgaatctaacgtacctgcagaaacatggtctg
cagataccactgctgtttagggataagtccgggctgggcttgcgagtacccagctccaac
ttctctgttaacgatgtcagaacttgcgttggttctaagagagtactggatgttatggac
gttaatactcagaagaatgaagatatgactatgaaagaatggcaaaagtattacgaagat
cccaacaaggaacgcttgttgaatgtgatctcattagaatttagtcataccaagttagag
aattatgtacaatcgcctgcactagtacgacaagtagattgggtagatgtagtatggcca
aggcatctgaaggaatctcaagtggaatctacgaaccttttagaagatatgatgtatcca
aaagtacagaagtactgcttaatgtcagtaaaaggttgttatactgattttcatgtcgat
tttggtggtacgagcgtgtggtatcatattctgcatggtggaaaaatcttttggctaatt
ccacccactgagaaaaacttgactctctatcaagagtgggtactgagtggcaaacagtca
gatgtattctttggtgatatggtagataaatgtggcaggataagtctaacggctggtatg
accctatttataccaactggttggatacatgcggtatatactcctcaggattctttagtc
tttggtggaaatttccttcatagtttcggtatagaaatgcaattgaaagtggcacaagta
gaagaacatacaaaagtaccacagaaatttcgatatccattcttcacagaaatgttgtgg
tatgttctcgaaagatatgtgcatgtgctgttgggtagaagtcatttggatatatctgaa
tcacagcgacaacacttagtcccgcaacatcatcagcatgtacatgtaacggatttcgaa
ttgcatggcttgaaatctatagtaatgtatctgcattcattgccatcaaccaagaagaac
gttccggaactaatgcgtgatccagtcgctcttattcatgatgttcgatgtttggtagag
cagcatagacacgataatccagaagcggcagtgacaggcaatcctgtgttacctccacca
ccacccttgactattgttgacagggaacgcttgagagtagtgcgaaaaggttttgtaaaa
tcgcaaagacatcactcggacaagtccgaaagagcatttccacgtaggagacgtactaga
tgtaagaaatgtgaagcttgcactagacaggactgtcgggagtgcgtattttgtcaagac
atggtcaaattcggaggcagcggtcgcgctaaacaaacatgtctcatgcgccaatgtctt
agacctatgcttcccgtcacatcatcctgtaaagtctgtcgtttagatggctggaaacaa
ccacctgcaccattaacgggtaaatctttccccacaacaccatctactttaatggaatgt
tcaatctgcttcgacattgtacatccagagtgtataggcttgaactccaaggagataact
gtcaatgatgatttaccgaatagttgggagtgtccagagtgttttgagcgaggtcggaac
ttggattgtcggccgcgtcacgcaaggggtcgtacgcgaaaactatcaatatccagtgcg
gcttcttcagcgccgacgacagattctgaacgagctatgacaccgagtaaacaatcgagg
cttgatcctaacgacgcgtggaacgattcgcccggggagccagccgaaggtgaacagaga
atgactcagcaacgtacccagttagctatgcagttgattgcctcgagcagcagatcttta
gtaaggccgcatgtagtggttaggccagcaccgccaccacctattcaagaaacggatggc
gaaaacgaacagaatttggtatacaacaagacagcagtgcttgcgatattcagattcctc
agtataaaggatctgcttaattgtgccttggtttgccgtacctgggcgagatacagtaca
gatttcagtctttggaagaaactcgacatgtcgcactacagccttcgttccgtacacttg
acggttattgtccgccgacaacccgagtgtcttttgctggactggaccaacatcaataag
atgcaattagcttggctgttggaaagattaccgcagttacgaacattgtctcttcagggc
tgtacttgggccggtgttcgtgccctgaaaagatgcagctgtccgcctctagaaaagctg
aatctgagttatgttacctctttgaatgatactgttttgcaagaaatcctggattcacca
acagattcaagacctggcattatcgataaaacatcacgattgaaacatctcaagaattta
tctttagccggatgcgatctcacggatcgaggagtgagatatatagtccagcaattatcg
gatcttgaaactttagacctttcctcgattggcaggctcaccgattccggagtagcgcat
ttgacgtcgctatcaaatctggcgtcgctgaatctagcaaattgcaagttgctcactgaa
acgactctcgatcatctagcgaaatgtaaggcattaaaacggctggatctgcgacacaca
acccaagtatcaacacaagctgtcatcaagtttgctgctaaaagcgaacataatttgcat
gtaacggacgttaagttggtggaagagaagaagaaggttaaaaccgattttatggacacg
tga

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