Atta colombica: 108690324
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Entry
108690324 CDS
T11098
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
acoc Atta colombica
Pathway
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108690324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108690324
03032 DNA replication proteins [BR:
acoc03032
]
108690324
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108690324
mRNA cycle factors
Common to processing body (P body) and stress granule
108690324
DNA replication proteins [BR:
acoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
108690324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
108690324
NCBI-ProteinID:
XP_018053043
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MADRNKGRRNREEISQELKTPKLEKERLVEMRGGGNRAPQALYRPGSGPLRKSDRSNSIA
DEYDNENGSQEKSRLTSVQYHPRQSQPNRANQAQNSPPLSQIDNVAKKLDNTHINYRNSS
NSESVQNPSNNSDGGAGRNDPKKKNRKPEQLLYVPKKVKEALAEQDGINRSPSHTTWDRE
REESNDRDSHSNRNHKSDRNRASSHTMRDNESESRSRDDTNKRYSGNRRHRHANENEERY
WRTESPASARNCANRKDNSREVRQGSEPLSLTNQNDFNRTRDTRSVEPVGHSDKFQGKPP
SGRRNPKDTLSKNIKLDLLPPRLQKKYLLDNGYALPSNIPGTSTEDSWNGSSITFQGLSS
YNYPLSMQHSQTLQNLPPSGLLQSPQSNWTNTVPTRSRGRGRLRPEEFDSTTGSIFRPVT
PDQYSAPSSRSHTPSQEYINNIRSYDRRGSNSTMYTSIESLSRADSIMIPPPLSASPATS
QSNSNRGHRSPENHRRSAISPIDDRTNNMQRTITSNAYEYNLNMDKQNNQQNTNLSSTKN
ESCNKSSYTTSETFDWSEEVELNEKLEQEHLSRSSSILSIRESTSVLRSQAVGESHRRRK
KKKRDKHRDADRGSSRDKGRGNSRERQKNQQNRENDNYNNNQKNSNSSSSSSRRYDHRRR
NIIQRSRESSKDRNYSNSYRNFDELHRRRTDRYLDEDWRTGRKISTCESDDGRQTPKVSS
HTAPLSSVNSNSTVHRSSPTGYSNAPGVLILPNETSQSSPNQTATTSQQGTGQQQQRTLF
DPNNPHKPIVITSPGSRAAVQRDNDMQVSSVPVFQSNVGITSPHYSFHGAQLDGMPPPYM
NDQIGNVRPPWYEPFSASFHSAKNHCLLLDIERADLELQWIISSGGFTSRLDRVSYIRHF
LQQSLKILLETDIKFCQAENVEQHFWKILFYNLIEMLRKAMPKENSEGRERYKQIMLNII
DEGTTYLESLLATLETTYQFKLDAFLASSSLPKGLGLLGLALVSAQKIFLFLGDLARYKE
QANETSNYGKSRQWYLKAQQINPKNGRPYNQLALLAHYARRKLDAVYYYMRSLMASNPFH
SARESLIGLFDENRKKYLHYYESIERKRKEERESKERARMKEKEGANIIGGGLRRETWIH
PGDGRRVRRTTSAANEARLSHASDLEELSQLTSVEVNKRFVTSYLHVHGKLITKIGMETF
QEAGVQMLKEFRALLQHSPLPLPGTRLLQLLALNMFAIETTQLKDSQMEQGYRSEVQERA
LVVSLQMFSLILERGVYLLKAQLDSEQEPRLVVGEDLQVLLPAIKIWCDWMLCHSTVWNP
PPSCTDYRVGPPGDAWSRLATMVNLLEKLNYTRTTLIQGKDTEDREEDLELVKLPEDITL
AGFTPLMLNPQDPCYVEKTEDMEVAQMCLRISKILFFGQVFLCGLETPVLKLQKSETGVS
EYVSVVEASSTSSPSSPPTQSDSELMVESYSEGEEDSISTLRRLPSCGNVTDDMTAPVAA
VEIRSLIERKEELERRQRKQDRHRQRVQAILQKSSVSVEIEVRPRQLVPDTNCFIDYLQQ
LQIIARAISGAQPIYTLMVPLVVLNELEGLARGADARDCPPASRATLNPEHVVRVAESAK
AALAFARSRNPAIRCLTTRGTVLTSSTFTVEEDVDKDGLTRNDDRILTTCLSLCRSNKDQ
ANAEEGQPRRLRREVVLLTEDRNLRVKALARDVPVREVPDFMQWAGLG
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgcaacaaaggacgcagaaacagggaagaaatttcacaagaattaaagact
cctaaattagagaaagaaagattggtagagatgcgtggcggaggaaatagagcacctcag
gccttatacagaccagggagtggccctttacgtaagtcggacagatctaacagcattgcc
gacgaatatgataatgaaaatggctcacaagaaaaatctagattgacctccgtccagtat
catccgagacagtctcaacctaatagagcaaatcaggcacaaaatagtccacctctatca
caaatcgataatgtagctaaaaaattggacaatacccatattaactatagaaatagcagc
aatagcgaatcagtacaaaatcctagtaacaactctgacggaggagcaggtagaaacgat
ccaaaaaagaaaaataggaaacctgaacagttgttatatgtaccaaaaaaagtgaaagaa
gcattggctgaacaggatggaattaacagatctcccagccatactacatgggatcgagag
agagaagagagtaatgatcgcgattcacattcaaatcgtaatcacaaaagcgatcgcaat
cgtgcgagtagtcacactatgcgagacaatgaaagtgaaagcagaagtagagatgacact
aataaacgatattcgggcaatcgtcgacatcgtcatgcaaatgagaatgaagaacgttat
tggcgaaccgaatcgccggcatccgctagaaactgtgctaatcgaaaggataattcacgt
gaagttagacagggctcggaacctttatctttgaccaaccagaatgattttaatcgtacg
cgagacactcgcagtgtagagcctgttggacattcggataagtttcaaggaaagccacca
tcaggtcgacgcaatccaaaagacactttatcgaaaaatatcaagttagatctcttgcca
ccacgattacaaaaaaaatatctccttgataatggatatgcattacctagcaacattcca
ggcacgtccacagaggactcctggaatggtagcagcattacatttcagggtttatccagt
tataattatccattatctatgcagcattcacaaacattgcaaaatctgccaccatctgga
ttgttgcaatctccgcaatctaattggactaacaccgttccaacgagaagcagaggtaga
ggtagacttagacccgaggaatttgatagtacaactggtagtatttttaggcctgttaca
cctgaccaatattcggctccaagttccagatctcatactcctagccaagaatacataaat
aatatacggtcttatgatcgccgtggtagcaatagcactatgtatacaagtatagaaagc
ttaagtcgtgccgatagcataatgatacctccacctttatctgcatcgcctgcaacttca
caatcaaattcgaacagaggtcacagatcacctgagaatcatcgcagaagcgcaatatca
ccaatagacgatcgcactaataacatgcaaagaacaatcaccagtaatgcctatgaatac
aatttgaatatggacaagcagaataatcaacaaaacacgaatcttagttccacgaaaaac
gagtcatgtaataaatcatcttataccacatctgagacatttgattggagtgaagaagtt
gaattaaatgaaaagttagaacaggaacatttgagtcgtagttcatccatattaagcata
cgagaaagcacaagtgtgctgcgaagtcaggctgtgggcgagagtcataggcgacgtaaa
aaaaaaaaacgtgataaacatcgtgatgctgatcgtggcagtagccgagataaaggacga
ggtaatagccgcgaacgtcaaaaaaatcaacagaatagagagaatgataactataataat
aatcaaaagaatagtaatagtagtagtagtagtagtaggcgatatgaccacaggagacgt
aatatcattcaacgtagccgagaatcgagtaaagacagaaattatagtaacagctataga
aattttgacgagcttcacaggcgcagaactgatagatacttagatgaagattggagaaca
ggtaggaagatatcgacttgcgagtcggatgacggaagacaaactcctaaagtttcttcc
cacaccgctccactttcgagtgtgaattcaaactctacagtacaccgatcatctccgacg
ggatatagtaatgccccgggtgtcttgatcttgcctaacgagactagtcagtcgtctcct
aatcagacagctacaacttctcaacaaggaactgggcaacaacagcagagaacgctattt
gaccctaataatccacataaacctattgttattacttcacccggaagtagagcagctgtt
caaagggataatgacatgcaagtctcaagcgttccagtatttcaatctaatgtaggtatc
acatcaccacattattcttttcatggtgcccaactggatggtatgccaccaccatacatg
aacgatcaaatcggaaatgtgagacctccgtggtatgaaccgttctctgctagttttcat
tcagcaaagaatcattgtcttttattggacattgaacgtgctgatctggaattacaatgg
ataataagttccggtggctttacctcgcgtttggatagagtctcatatatacgacacttt
cttcaacagagcttaaagatcttgctcgagactgatatcaaattctgtcaagcggagaat
gttgagcaacacttttggaagatattgttttataatctcattgagatgctgcgaaaagca
atgcctaaagagaactcggaaggacgagaacgttacaagcagataatgttaaatatcatt
gatgagggtaccacttatctggaaagtttattggctactctcgagactacgtatcagttc
aaattagatgcgtttcttgcatcatcaagtctacctaagggtcttggactcttgggtttg
gccttagttagcgctcaaaagatatttttattcttgggagacttggcgaggtacaaggag
caagcaaatgaaacaagcaattatggaaaatctaggcagtggtacttgaaagcacaacaa
atcaatcctaaaaatggcagaccttacaatcaacttgccttactggcacattatgcaaga
cgaaagttagatgccgtatattattacatgcgatctcttatggcgtccaatccttttcat
tctgccagagaaagtttgattgggctcttcgatgaaaatagaaaaaagtatctacattat
tacgagtctatcgaacgtaaacggaaggaagaaagggagtcgaaggaacgagcgaggatg
aaggaaaaggaaggtgcgaacattatcggcggtggactaaggagagagacatggattcat
ccaggtgacggtaggcgggtacgacgtacaacgagcgcggccaacgaagcaagattgtcc
cacgcaagcgacttggaggagttatcgcaattaacgagtgtcgaggtgaacaagcggttt
gttacttcataccttcatgttcacggaaagcttatcaccaagataggaatggaaactttt
caagaagccggtgttcaaatgctgaaggaattcagagctttgttgcagcactcgccacta
ccgcttcctggtactcgtttacttcagcttttggcgctgaacatgttcgcaattgagacc
acgcagctaaaagattctcaaatggagcaaggctatagatcagaagtccaagaacgagca
ctcgtcgtatcgttgcagatgttcagcttgatcttggaacgtggtgtctatctactgaaa
gctcagctagatagcgagcaggaaccgaggctggtggtcggcgaggatctccaagtgctt
ctaccggctattaagatctggtgcgattggatgctttgccatagcactgtttggaatcct
ccgccgtcttgcacggattacagagtcggaccaccaggagatgcatggagcaggttagcg
acgatggtgaatcttctagagaaattaaattacactaggacgactctgattcaaggcaag
gatacagaggatcgtgaggaagacttggaactcgtaaaactaccggaagatatcacgttg
gctggattcactcctctcatgttgaatcctcaagatccttgttatgtggagaaaacggaa
gatatggaagtggctcagatgtgcctcaggataagcaagattctcttcttcggtcaagtg
ttcttgtgcggtttggagacaccggtgctgaaattgcagaaaagcgagaccggcgtcagc
gaatatgtttccgtggtcgaggcttcgagcacgagttcgccgagttcgccgccgacacag
agcgactcggaactcatggtagaaagttacagcgagggagaggaagattcgatttctacg
ttgagaagattaccctcatgtggcaacgtgaccgacgatatgacggctcccgtggcggct
gtcgagataaggtcgctgatcgagaggaaggaggaactggagaggcggcagcggaaacaa
gatcggcatcgacagcgagtacaggctattttacaaaagtcctcggtgtcggtagaaatc
gaggtgcgaccgagacagctggtgccagacactaattgcttcatcgattacctacagcaa
ttgcagatcatcgcgagagccatttccggcgcgcagccaatctacactctcatggtgcca
ctcgttgtactaaatgaactcgaaggtctagctcgaggcgccgatgcgagagattgtcct
ccagcgtcgagagcgactctgaatcctgagcatgtggtgcgagtcgccgagagtgccaag
gcggcattggccttcgcgagaagtcgaaatcctgcgattcgatgtttaaccactagaggc
accgttcttacatccagcacttttacggtggaagaagatgtcgacaaggatggattgaca
cgaaatgacgatagaatattgactacgtgcctcagtctttgcagaagcaacaaagatcaa
gcaaacgcagaagagggacagccgagacgtttgagacgggaggtagttctgctcacagag
gaccggaatctcagggtgaaggctctggccagggacgtgcccgtgagggaagttcccgat
ttcatgcaatgggctggactcggctga
DBGET
integrated database retrieval system
