KEGG   Atta colombica: 108693910
Entry
108693910         CDS       T11098                                 
Name
(RefSeq) TNF receptor-associated factor 6-A-like
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
acoc  Atta colombica
Pathway
acoc04013  MAPK signaling pathway - fly
acoc04120  Ubiquitin mediated proteolysis
acoc04140  Autophagy - animal
acoc04144  Endocytosis
acoc04214  Apoptosis - fly
acoc04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108693910
 09130 Environmental Information Processing
  09132 Signal transduction
   04013 MAPK signaling pathway - fly
    108693910
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108693910
   04140 Autophagy - animal
    108693910
  09143 Cell growth and death
   04214 Apoptosis - fly
    108693910
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108693910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoc04131]
    108693910
   04121 Ubiquitin system [BR:acoc04121]
    108693910
Enzymes [BR:acoc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108693910
Membrane trafficking [BR:acoc04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108693910
Ubiquitin system [BR:acoc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    108693910
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 U-box zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-Nse zf-rbx1 zf-ANAPC11 Prok-RING_4 iSTAND TRAF3_RING Sina_ZnF
Other DBs
NCBI-GeneID: 108693910
NCBI-ProteinID: XP_018058596
UniProt: A0A195BU78
LinkDB
Position
Unknown
AA seq 357 aa
METSDNSVEPAKVAEENENCENIKGYVEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTW
LKKEGACCPVDSQPLKSENLFPDLYTTREISQKRTSCIYQQFGCQVKLSPVDMETHIIQC
TYKQDISESRVQNSTNAMSVESKLWDPPLKNRIQVADKEEPSPDWQQLLKNLYERIVVLE
QENRELSITVSNQKNQLATMCLRNCNGVYIWRLKSFQEKLDAMTNDPQKMFYSPGFYTSP
NGYKICARINISSKNPDYLSFLLHIMKSDNDDALDWPFNGTMFFALVHPQNSEKNICEKT
SSILGLEAFQKPTCELNKRSFGYTEFICVRDITDFLRHDTLILKIEVYPISYRDNIK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggaaacgtcggacaactcagtagaacctgctaaagtcgctgaggaaaacgaaaactgt
gagaatatcaaaggctatgtagaacctagatttgagtgtcccatatgtctaacatggcta
cgcgatccagttttaacatcttgtggccataaattttgttctcagtgtatttatacttgg
cttaagaaagaaggcgcttgctgtccagttgatagtcaacctttgaaatctgaaaatctt
ttcccagatctttataccactcgagagatatctcagaaacgtacaagttgtatttatcag
caatttggttgtcaagtaaaattgtctcctgtggatatggaaacacatatcattcaatgc
acatataaacaagatatttcagagtctcgagtacaaaatagcactaatgcaatgtctgtg
gaatcaaaattatgggatccacctctaaaaaataggatacaagttgcagacaaggaagag
ccttctcctgattggcaacaattgctcaaaaatctgtatgaaagaatagtagttttggaa
caagaaaatcgggagctctctataacagtatctaatcaaaaaaatcagctcgcaactatg
tgtctacgaaattgtaatggagtttatatatggagactgaaatctttccaagaaaaactc
gacgctatgacaaatgatcctcaaaaaatgttttatagtccaggtttttatacaagtcca
aacggatataagatctgtgcgaggattaatatatcatccaagaatcccgattatctgtct
tttcttttacatattatgaaatcagacaatgacgacgctttggactggccatttaatggt
acaatgttttttgcgttggtacatccacaaaattcggaaaaaaatatatgtgaaaagaca
tcgtcaatactaggtcttgaggcattccaaaaacccacgtgtgaattgaataaacgtagc
ttcggttatacagaatttatatgtgtgcgcgatataactgattttctgcggcacgatact
ttaattttaaaaattgaagtttatcctatatcttatagagataatatcaaatag

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