Aphelocoma coerulescens (scrub jay): 138098750
Help
Entry
138098750 CDS
T10543
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00310
Lysine degradation
acoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138098750 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138098750 (SETDB1)
Enzymes [BR:
acoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
138098750 (SETDB1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
138098750 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
138098750 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
YkyA
Motif
Other DBs
NCBI-GeneID:
138098750
NCBI-ProteinID:
XP_068851616
LinkDB
All DBs
Position
25:complement(1942911..1961785)
Genome browser
AA seq
1286 aa
AA seq
DB search
MEEMDSQDIKELQQEVMEELGISMEELQEIIDKEVENSEWVRQRKQQLEELEQCMRHKEE
EVAHVDQLIDDAMRAINKCETLAKELYSMMGLQYRESSSEDEAPAAAEVIEIPDEEDDDV
MSVDSGWKRSSSSPRISRDQSLLREAMVAMRKSARDVAKFMDAVSKKTSLQEAQKDAQPP
QESPGAAQPVVVPAAPENDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKV
KFDNKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDR
FLIFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQ
LIKTEWEGTWWKSRVEEVDGSLVKILFLEALPTGTVSVPFSFPQEDKRCEWIYRGSTRLE
PMFSMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKTPEQPPAAR
PASPQPAEMECSDNQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLSDAPAAGRALPAP
QHRLPSSAPSQPFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYACLSRVRPIRSDQYRSRN
PLLIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMQEIERYLFETDCDFLFLEMF
CLDPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVY
INTSWEFLVGCDCKDGCRDKSRCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGV
YECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILT
DDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDDENTGTDE
LEESNEDSSDDNFCKDESFSTSSVLRSYATRRQTRGQRDHGLSETASKDSGLTRPLGHDE
PATAPPCKLPVSEETSKNKVASWLSSNSMAESFQDNDGASSFRAGEGGEAKGVKMEVATE
REKGCAATPGDLNGEAKAAKKEEPEESTRISGLSSLGRRYGYNPCPPKLEGIRRPVSGTV
MLQNRRRSLGLPPPSEDVLTLSSSTDSDGENGQAPGRANDSDDIQTISSGSEEEEGEDKK
NPSSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEE
NCYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatggattcccaggacatcaaagagctgcagcaggaggtgatggaggagctg
ggaatctccatggaggagctgcaggagatcatcgacaaagaagtggagaattccgagtgg
gtgaggcagcggaagcagcagctggaggagctggagcagtgcatgaggcacaaggaggag
gaggtggcccacgttgaccagctcattgacgatgccatgagggccatcaacaagtgcgag
acgctggccaaggaattgtattccatgatgggcctccagtaccgggagagcagctccgag
gacgaggcgccggcggccgccgaggtcatcgagatcccggacgaggaggacgacgacgtc
atgagcgtggactcgggctggaagcgcagcagcagcagtcccagaatctccagagatcag
agtctgctgcgggaagcgatggttgccatgaggaaatctgcccgggacgttgcgaaattc
atggatgctgtcagcaagaaaacgagcttgcaggaagcacagaaagatgcacaaccccct
caggaatctcctggcgctgcccagcccgtcgttgtccctgcagcccctgagaacgatctc
aacactgatggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaaaacg
tggcacaaggggacgttgattgccatccagacggtcggtgctggcaagaagtacaaggtg
aagtttgataataaaggaaagagtttgctctcgggcaaccacattgcctacgattaccac
ccctctgccgagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaat
cagatgtggctctatgctgggatcgtggctgagacccccaacgtcaagaataaagacagg
ttcctgatcttcttcgacgacggctacgcgtcctacgtgaaggagtgggagctctacccg
gtctgccggccactgaaaaaagcctgggaagacattgaggatgtttcctgtcgggatttc
attgaggaatacatcactgcctaccccaaccggcccatggtgctgctgaagaatgggcag
ctgatcaaaactgagtgggaagggacctggtggaaatccagagtggaagaagtggatgga
agtctggtcaaaatccttttcctggaagctctacccacgggaactgtcagcgttcccttc
tcgttccctcaggaggataaacgttgtgagtggatttaccgaggttccacacgcctcgag
cccatgttcagcatgaaaacttccacagcttctacccaggaaaagaagcaaagtggccaa
accaggactcgtcccaatgttggtgctgtgaggagcaagggccctgtggtccagtacacc
caggatttagcgggagctggtccccagtacaagactccagagcagcctccagctgcccgc
cccgcgtctcctcagcctgcagagatggaatgctccgacaaccagctggcccagggcaga
aagcaggtggccaagaaaagcacttccttccgtcctggctccgtgggctccgggcactcg
tccccgtcctcccccgtcctcagcgacgccccagcagccgggagggccctgccggccccg
cagcaccgcctccccagcagcgctccctcccagcccttccacggcatgatggaccgcgtt
cccaacgagccgtcctaccgggcccctctggagaagctcttctaccttccccacgtgtgc
agctacgcgtgcctgtcgcgggtgcggcccatccgcagcgatcagtaccgcagccgcaac
ccgctgctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaac
cgcaagatgggcttccacgtgctctacaaaacgccctgcgggctctgcctgcgctccatg
caggagatcgagcgctacctcttcgagacggactgcgacttcttgttcctggagatgttc
tgcttggatccctacgtgctggtggatcggaagttccagccttacaagccgtactactac
atcgccgacatcaccaagggcaaggaggacgtgccgctgtcgtgcgtcaacgagatcgac
aacaccccgccgccgcaggtggcttacagcaaggagcggattcccggcaagggggtgtac
atcaataccagctgggagttcctcgtgggttgtgactgcaaggatggctgtagagacaaa
tccaggtgtgcctgtcaccagctgaccatccaggccagcggctgcacccccggagggcaa
atcaaccccaactcgggctaccagcacaagcggctggaggaatgtctcccaacaggcgtt
tacgagtgcaacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtgcag
cacggcctccaggtgcgcctgcagctcttcaagacccagaacaaaggttggggcattcgc
tgcctcgatgacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctcacg
gatgacttcgctgacaaagaagggctggagatgggcgacgagtacttcgccaacctggac
cacatcgagagcgtggagaacttcaaggaaggctacgagagcgacgccaagtgctcctcg
gacaacagcggcgtggacctcaaggacgacgacgacgacgagaacacgggcacggacgag
ctggaggaatccaacgaggacagctccgacgacaacttctgcaaggacgagagcttcagc
accagctcggtgctgcgcagctacgccacgcgccggcagacgcgcggccagcgcgaccac
ggcctctcggagacggcctccaaggactcggggctcacgcggcccctcggccacgacgag
cccgccacggccccgccctgcaagctgccggtgtccgaggagacctccaagaacaaagtg
gcctcgtggctgagctccaacagcatggccgagagcttccaggacaacgacggcgcctcg
tccttcagggcgggcgaagggggagaagccaaaggtgtgaaaatggaggtggctacggag
agggagaagggctgcgccgccacgccgggagatctgaacggagaggcgaaggcagccaag
aaggaggaacccgaagaatcgaccagaatttccgggctgagcagcctgggaaggaggtac
ggctacaacccctgcccccccaagctggaggggatccggaggccggtgagtgggacggtg
atgctgcagaaccgccggcgatccctgggcctgccgcccccctcggaggacgtgctgaca
ctgtccagcagcaccgacagcgacggggagaacgggcaggccccgggcagggccaacgac
agcgacgacatccagaccatttcctcgggatctgaggaggaggaaggggaggacaagaaa
aatccatcatctgggtcaggtcccgtgaagagacaggtggctgtgaaatccacccgaggc
ttcgccctcaagtccacccacggcatcgccatcaaatccacgccgctggcagcggccgac
aagggcgagagcgcggggcccgtgcgccgcagcacgcggcagttctacgacggcgaggag
aactgctacatcatcgatgccaagctcgagggcaacctgggccgctacctcaaccacagc
tgcaccccaaacctcttcgtgcagaacgtctttgtggacacccacgaccttcgcttcccc
tgggtcgccttcttcgccagcaagcggatccgagccggcacggagctgacctgggattac
aactacgaggtcggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgac
tgccggggccggctgctctga
DBGET
integrated database retrieval system
