KEGG   Aphelocoma coerulescens (scrub jay): 138099161
Entry
138099161         CDS       T10543                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03440  Homologous recombination
acoe03460  Fanconi anemia pathway
acoe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138099161 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    138099161 (BRCA1)
   03460 Fanconi anemia pathway
    138099161 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:acoe01009]
    138099161 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acoe04121]
    138099161 (BRCA1)
   03036 Chromosome and associated proteins [BR:acoe03036]
    138099161 (BRCA1)
   03400 DNA repair and recombination proteins [BR:acoe03400]
    138099161 (BRCA1)
Enzymes [BR:acoe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138099161 (BRCA1)
Protein phosphatases and associated proteins [BR:acoe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     138099161 (BRCA1)
Ubiquitin system [BR:acoe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    138099161 (BRCA1)
  Multi subunit type E3
   BRCC complex
    138099161 (BRCA1)
Chromosome and associated proteins [BR:acoe03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     138099161 (BRCA1)
DNA repair and recombination proteins [BR:acoe03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     138099161 (BRCA1)
    BRCA1-A complex
     138099161 (BRCA1)
    BRCA1-B complex
     138099161 (BRCA1)
    BRCA1-C complex
     138099161 (BRCA1)
    BRCA complex
     138099161 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     138099161 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 BRCT_2 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_2 zf-C3HC4_3 zf-RING_6 zf-Nse BRCT_3 zf-RING_5 zf-RING_10 RTT107_BRCT_5 F46C5_7 Zf_2nd_IFT121 Pepco zf-ANAPC11 zf-MIZ
Other DBs
NCBI-GeneID: 138099161
NCBI-ProteinID: XP_068852345
LinkDB
Position
27:complement(3439593..3459381)
AA seq 1803 aa
MDFSVITVGHVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLISKKKKGVA
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIRAFELDTGVKFLKSHHFPKTSTEATAPES
LCKESSVIQSKGFRNRRKSAKGNGQENCTLQGASVNIQLTETKMYRPRNKPQKCDSSKGI
YMEFGSESSEEFFKQASKTGFEDKAADQISSQERLEELESAEKRNENSCNAQPDKLCAKE
ITLPNIIGESGFSKEGLSEKSTQSITECAKPDQVNVTECQSSALSVLPVDLLPEQRDRIG
AASPTVSRDTSFFKNSEEMGEKQTQCSSKNQEFDSEDSSEGRLDKNREMDTDVQNVEAVE
ACEPENDSENDKELPLEKLHQPETLHSATLNKVSKKRLKRSIQKVNEWFSKSNEILSSSS
SLDESAVSADVSGEGDLCLSDKESCISEKTDPMVDSMEIAAVEGNKRWSKQTADDIKDKI
FGKTYKRERKSNPPSALKDILPTTRKEDVAADKCLNNFSKNRLKRKRKTACVLQPEDFIK
KKDTEEADGGPQSVNCCLGDAEKKRCDESVAVNESHLSQNRANNTLTELEEAGGSTWKKA
TEEVTGKHCDGELEMYNCDQKSTRKRSSAAKRCRHSSRTMCALQLVVDRSSVFPDPAEPQ
IDSYPSSGEPRKVDSEQKQVRRSRRLQLLTEEMTKETRKGVKGARKSNSDHGRSVPGGQR
NVGTDSAECKDLCEPQDMLSYKPATNLKGGDLEANEVQVSLKNLSDTAETGKSLFSPSCQ
PSNCGPTAPHTSSQDREIQGSPLLLQPPSVTAVQTACHQTEEMTESRTAFPQECGQDSQS
VPGDFKTDKLPMAKNVLELTKEAEDSELDTQYLRNIFRHSKRSSFSLFQTPRQARAVEGP
ASETLSCAAQGENKHSKQLQPESLQEEKTAAQSLSRVSEQEELKTCESTHVDHVSSLVVS
TGEHRKDISQAAGEGTLAAVMRTGAAQTEDKTRLLQEEQGHEKPVSTEIGIERELRQNSI
KSNRSQSDQSNTEKHDSKEMDLNIGREIGFSSESNQAGRTEVDCKGPTLHFQSKAMICPA
TCQQSPAEFSCVVTRTKSSKRERKCVKGNEEQAAQTVSTAMPECLAAEALEEPLRGNSDL
TGLSETPDGLLCSDIEENTSLCEADRKEQSAVFVKSDNALGKELHNRNASSKPRSRGIHK
SRRRVQKLPSSDEESCEDEDLPCFQTLIFSKSASTPLQSDKQMTSVVESPVSPNTLPHGV
SNDDNIVQKVPEAAQSNVCVSPSQESECSVNLFSSQSNMSEESVNGAQELKKHLPEAHVS
KQMSSVNDSKDTFQNCDGGLKRTEDECQEDPDMGANLGEASGYDSEISIVEDSCGPLSQG
EILTTQQKNAMQNSLKKLQQEMAVLEAVLKQHGSQNCEALPVHRELPHAGTEGTFEMDQM
REGKRSPELLLPSSKSSLTQRLDLGKGLECDSVLNNESPSEKTKPVQEAVQEYRQCQLEA
ENAEGQKSGTRQNSTSVSLDLFGNVTQSPDNSSSSVGLCTPQTAEATDGPVVPQNTDKSC
GPGHKLKQSVCFPAPVLDNATGKENATSPVVTKRKEMSIVASGLNHSELLVVQKFVKKTQ
STLSNHITEGTTHVIMKTDEELVCERTLKYFLGIAGGKWVVSYQWIIQSFKERRILDEEN
FEVRGDVINGRNHQGPKRARQALTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVK
QPDLFSHTANSTAVVVVQPDAWKENTDYRAMHQQNNVAVVTREWVLDSVACYECQEFSAY
LMS
NT seq 5412 nt   +upstreamnt  +downstreamnt
atggacttctcagtgatcactgttgggcacgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgtttggacgtggtccaagaacctgtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaacttatcagtaaaaagaaaaaaggtgtggca
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattattggagactatccgtgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctaaaacatccacggaagccactgctcctgagtcc
ctgtgtaaggaaagttctgtcatccaaagtaagggcttcagaaacaggagaaaaagtgct
aaagggaatggacaagaaaactgcaccttgcagggagctagtgtgaatattcagcttaca
gagaccaaaatgtatcgtccaagaaacaaaccccagaaatgtgactcttcaaagggtatt
tatatggagtttggctctgaatcatctgaagaattttttaaacaggcaagcaaaactggg
tttgaagacaaagcagcagatcagatttcttctcaagaaaggctagaagaacttgagagt
gctgagaagaggaatgaaaattcttgcaatgcacagcctgacaagctgtgtgctaaagaa
ataacattaccaaatatcataggtgaaagtggtttctcaaaggaaggcttgagcgagaaa
agcactcagagcatcactgaatgtgccaaacctgaccaagtgaatgtgactgaatgccag
agttctgctttaagtgttcttcctgtagacctactcccagagcagcgtgacagaattggt
gctgccagtcccacagtgagcagggacacatcattctttaagaactcagaagaaatgggt
gaaaagcaaacccagtgcagcagtaaaaaccaagagtttgattcagaagatagctcagag
ggcaggctggataaaaacagggaaatggatactgatgtacaaaatgtggaagctgtagag
gcatgtgaacctgagaatgactcagagaatgacaaagagcttcctctggagaagctacat
cagccagagacacttcactctgccaccctgaataaagtctccaagaagagactgaagcgg
agcattcagaaagtcaatgaatggttttcaaaaagcaatgagattttgtcttccagttct
tccctggatgaatctgctgtatcagctgatgtttcaggtgaaggagatctgtgtttatca
gataaagagtcctgtatttcagaaaagactgaccctatggtagattccatggaaattgca
gcagttgaaggaaacaagaggtggtcaaaacaaacagcagatgacatcaaagacaaaata
tttggaaaaacatacaagagagagaggaaatcaaatcccccttctgccttaaaagacatt
ttacctactacaagaaaggaagatgtggctgctgataagtgcctgaataatttcagcaaa
aacagactcaaacgaaaaaggaagactgcctgtgtcctgcaacctgaggatttcatcaag
aaaaaagatacagaagaggcagatgggggccctcaaagtgttaactgctgccttggagat
gctgaaaagaaaagatgtgatgaaagtgttgctgttaatgagagtcacctttctcagaat
agagcaaataatacactaacagaacttgaggaagcaggaggatccacatggaagaaagct
actgaggaggtcactggcaagcactgtgatggggaactagaaatgtataactgtgatcag
aaaagcaccagaaaacgaagttctgcagcaaaaagatgcaggcattctagtagaactatg
tgtgctctacagttagtagtggatagaagctctgttttccctgatccagctgagccacag
atcgatagctatccaagcagtggagagcccaggaaagtcgattctgagcaaaagcaagtc
agacgcagcagaaggcttcagttacttactgaggaaatgacaaaggaaacaagaaaagga
gtaaagggagcaagaaagagtaacagtgatcatggaaggtctgtccctggaggccaaagg
aatgtgggaactgactctgctgaatgcaaagacctgtgtgagcctcaagatatgctgagt
tacaagccagccactaatttgaagggaggtgatctggaagcaaatgaagtgcaggttagt
ctaaagaatttatctgacactgcagaaactggaaaaagtctgttcagtccttcatgtcag
ccttcaaactgtggtcctactgcacctcatacaagttctcaagacagggaaatacaaggt
agccctctcctcctgcaacctccttcagtgactgctgtgcaaactgcttgtcaccagact
gaagagatgactgaatcacgtactgcctttccccaggagtgtgggcaggattcacaaagt
gttccaggagacttcaaaactgacaagttgccaatggctaaaaatgttttggagttgact
aaggaagctgaagacagtgaattagacacgcagtatctgcgaaatatatttaggcattca
aagcgctcatcctttagcctttttcagactcccaggcaggcacgtgcagtggaaggtcct
gcttctgaaactttatcgtgtgctgctcagggagaaaataaacatagcaaacaattacaa
ccagaaagcttgcaagaagagaaaacagctgctcaaagcttgagcagggtttctgagcaa
gaggagcttaagacctgtgagtctacccatgttgatcatgtgtcttccttagttgtcagc
acaggagagcacaggaaggatatttcacaggctgcaggggaagggactctggcagcagtg
atgagaacaggggctgctcagactgaggacaaaaccagattgctacaagaagagcagggc
catgaaaagccagtgtcaactgagatagggatagaaagggagttgagacagaattccatc
aaaagtaatagaagccaaagtgatcagagtaacacagagaagcatgattccaaagaaatg
gatttaaacataggccgggaaataggcttcagttcagaaagcaatcaagcaggaaggact
gaagttgattgcaaaggaccaactctgcattttcaatccaaagcaatgatttgtcctgca
acttgtcagcaaagccctgctgaattcagctgtgtagtcactaggacaaaaagtagcaaa
agagaaagaaaatgtgtaaaggggaatgaagaacaagcagcccaaactgttagcacagca
atgcctgagtgtttagctgcagaggctctagaagaacctcttagagggaacagtgatctt
acaggtttgtctgaaactcctgatggcttgctgtgctctgatattgaagagaacaccagc
ttatgtgaagctgataggaaagagcaatctgcagtgttcgtaaaaagtgacaatgccctg
ggaaaagaactgcacaacagaaatgcaagttctaagccaagatctcgaggcattcacaag
tctcgaaggcgtgtgcagaaactgccatcttcagatgaagagtcctgtgaggatgaagac
ttaccatgctttcagacattaatcttcagcaaatcagcaagcacacctttgcagagtgat
aaacaaatgacatctgtggtagagtctccagtgagtcccaacacgttgcctcacggtgtg
agtaatgatgacaatattgtgcagaaagtgcctgaagctgcccaaagtaacgtgtgtgtt
tcaccaagccaggagtcagaatgctctgtcaacttattttcttcccagtccaacatgtct
gaagaatcagttaatggagcacaagagctgaagaagcatttaccagaagctcatgtatcc
aaacaaatgagcagtgtgaatgacagtaaagacactttccaaaattgtgatggagggctg
aagagaactgaagatgaatgccaagaagacccagacatgggagcaaacctaggtgaagca
tctggatacgacagcgaaataagtattgtagaagattcatgtggaccactctctcagggt
gaaatcctcactacacagcaaaagaatgctatgcaaaatagcctgaaaaaacttcagcag
gaaatggctgtgcttgaagcagtgctaaagcagcatggaagtcagaactgtgaagcttta
cctgtccatagggaattgccacatgctggtactgaaggaacatttgaaatggatcaaatg
agagaaggaaaaaggtctccagaattgttgcttccatcttctaaatcatctttaacacag
agattagatctggggaaaggccttgagtgtgacagtgttctaaacaatgaaagtccctct
gaaaagacaaaacctgtgcaggaagcagtgcaagaatacaggcagtgtcagcttgaagca
gaaaatgcagaggggcagaaatctgggaccaggcaaaacagcacatctgtctcgttggat
ctttttggaaatgtgacccagagtccagataactcttcctcttctgttgggctttgtacc
cctcaaactgcagaagccacagatggccctgtcgtacctcagaacactgataaaagctgt
ggcccaggacacaaattgaagcaaagtgtttgttttcctgcacctgttctcgacaatgca
actgggaaagaaaatgctacaagtccagttgtgactaagaggaaagaaatgtcaattgtg
gcatcaggtctgaatcacagcgagcttttggtggtccagaagtttgtgaaaaaaactcag
agcactttatctaatcacattaccgaaggaacaacccatgtcataatgaaaacagatgag
gagctggtgtgtgaacggacactgaagtacttcctgggcattgcaggaggaaaatgggta
gttagttatcagtggataattcagtcttttaaagaaagaaggatactggatgaggagaac
tttgaagttcgaggagatgtaattaatgggcggaaccaccaaggccccaagagggccaga
caggctctgactgaaaagatctttaaagactttgagatctgttgctatggacctttcact
gatatgactacagaacatctggagtggatggtggagctgtgtggtgcctctgtggtgaag
cagcctgatctgttctcacacacagcaaattctactgctgttgtggttgtgcagccagat
gcttggaaggaaaacacggattatagagcaatgcaccagcagaacaacgttgccgtggta
actcgggaatgggtcttggacagtgtggcttgctatgagtgccaggagttcagtgcttac
ctcatgtcctaa

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