Aphelocoma coerulescens (scrub jay): 138100706
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Entry
138100706 CDS
T10543
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138100706 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138100706 (LEMD3)
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
138100706 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
138100706
NCBI-ProteinID:
XP_068854675
LinkDB
All DBs
Position
1A:34873611..34917247
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AA seq
909 aa
AA seq
DB search
MATAAQLTDEELFSELRRFGFSPGPVTESTRPVYLKKLKKLREDERAGARSGGGANKTRN
SNNNNTGAGAAPGGGGGPGRAAPGARLASAEHPFVPGAAAGGGRGRAAPPAGGGKVLLGF
SSDESDVESSPRSQAGGRRERAAPLFRGLRPSAPHGACGVSSSSPPEEAARRKPNAWWGA
AARRPAATQGVRELGDGEEDDEEEKESEQQRWKNRTVNGNRLLAYGGSRDKYSDSDSEEA
GARAKQQGPKEESAIRRPRRSLSKSPAPFITSKCAAAGAGVMETGQERAGGGCDAGVLVT
NDRAAGAAAAGSLDRGRNQEEEEAAVVVVGGRGGGGCENLDSSPPSPRYRIGLSKKSPSV
LLLPPPLTDVDSGKVTDPPGTIRKATNNHVLSGAPGSCNVESRIYSSTNSLPPGGTTSSL
RLNHSNHTGSNHTYLKNTYKKNLSEPEEELLQQFKREEVSTTGGFSAHYLSMFLLTAACL
FFLILGFTYLRMRGSGVAEDVGANIKDPFSEELQKIQEGEISLMMKSLYALHDKLAQVAG
EHECGSSVQRNLTVQEAAAYLKNLDPEYESVLNTSLQWILNSGEDVGIKCLSNDPSEMDV
TNVTDVKYLESTSPKMSFRCRFRRAFVNVTHRLSILLWGIAMVWGVLHYMKYRWAKEEEE
TKQMYDMVVKIIDVLRSHSEACSENKELQPYMPILHVRDSLIPPQDRRKMNKVWNRAVDF
LAANESRVRTETRRVGGAEFLVWKWMQPSAACDKILVIPSKVWQGQAFHLDRRNSPPNSL
TPCLKIRNMFDPVMEIGDHWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSPE
YAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSHLRLRT
GTTNSQGSS
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggccgcgcagctcacggacgaggagctcttctcggagctgaggcgcttcggc
ttctccccggggccggtcaccgagagcacccggcccgtctacctgaagaagctgaagaag
ctgcgcgaggatgagcgggccggggcccgcagcggcggcggcgccaacaagacccggaac
agcaacaacaataacacgggagccggagcggcgccgggcggaggcggcggccccgggcgg
gcggccccaggagcgcggctggccagcgccgagcaccccttcgttcccggggctgccgcc
ggaggcggccggggccgcgccgcaccccctgccgggggcggcaaagtgctgctgggcttc
agctcggacgagtcggacgtggagagcagcccccggagccaggccggcggcaggagggaa
cgcgctgcgcccctcttccgcggcctcaggccctccgccccccacggcgcctgcggcgtg
agcagcagctcccccccggaggaggcggcccggcggaagcctaacgcctggtggggggcg
gcggccaggagaccggcggcgactcagggtgtgagggagctcggggacggcgaggaggat
gacgaagaggagaaggagagcgagcagcagcggtggaagaaccggaccgtgaacgggaac
cggctcctcgcctacggaggcagcagggacaagtactcggactcggactcggaggaggcg
ggggcgagggccaaacagcagggaccgaaggaggagtctgcaatccgccggcccagacgg
agcctcagcaagtctcctgctccattcataacaagcaaatgcgctgcagccggcgctggc
gtgatggagacgggccaagaaagggctggcggaggctgcgatgctggtgtgctcgtaacg
aatgacagggcggcgggggcggctgctgccggcagtctagacaggggcagaaatcaggag
gaggaggaggcggcggtggtggtggtggggggaagaggaggaggaggatgtgaaaatctg
gactctagtcctcctagccccagataccgcattggcctgtccaagaaatccccatcagta
ttgttgctgccaccaccgctcacggacgtggacagcggcaaagtcactgaccctccaggc
accattaggaaagcgaccaataatcatgttctcagcggtgctcctggtagctgtaatgtt
gaatccaggatctattcatctactaatagccttcccccgggtggaaccacctcctccctt
agactcaaccactccaatcatacgggttcaaatcatacctacctgaaaaacacctacaag
aagaatctctctgagcccgaggaggagcttctccaacagttcaaaagagaggaggtatcc
accactggaggcttcagtgcacattacctgtccatgttcctcttaactgctgcatgcttg
ttctttctgatactgggattcacatacctgagaatgagaggttctggagtagctgaggat
gtgggagccaacatcaaggatccctttagtgaagaactccaaaaaatacaagaaggtgaa
ataagtctcatgatgaagagcttgtatgcacttcatgataaattggcacaagtagcaggg
gaacatgaatgtggcagctctgttcagagaaaccttaccgtccaggaggcagctgcatat
ttaaaaaatttagatccagaatatgaaagtgtacttaacacatctttacaatggatcttg
aatagtggggaagatgttggcataaagtgtctcagcaatgaccctagtgagatggatgtc
actaatgtgacagatgtgaagtatctggaatctactagtccgaagatgtctttcaggtgt
cgttttcgccgtgcatttgttaatgtaactcacagattatcaatattgctttggggtata
gcaatggtttggggagtcttacactacatgaaataccgttgggcaaaagaggaagaagaa
acaaagcagatgtatgatatggtggtgaaaatcatagatgttctaagaagtcacagcgaa
gcatgttcagaaaataaagagttgcagccttacatgccaattttacatgtgcgtgattct
ctaatcccacctcaggacaggaggaagatgaataaagtctggaacagagcagttgacttt
cttgcagcaaatgaatctagagttcgtacagagacacgaagagtaggtggtgcagagttc
ttggtttggaagtggatgcaaccttctgcagcgtgtgacaagattttagtaataccatca
aaagtgtggcaaggccaagcatttcatctagatagaagaaattcaccaccgaacagcttg
acaccgtgtctaaagattcgcaatatgtttgatccagttatggaaataggtgatcactgg
catctagcaattcaagaagcaatcttggagaaatgtagtgataatgatggaattgttcat
attgccgtagacaaaaattcacgtgagggctgtgtatatgtcaagtgtctctccccggag
tatgctggaaaggctttcaaggcattacatggctcttggtttgatggaaagctggtaaca
gtaaaatacctgcgactagatcggtatcatcatcgttttccccaggctcttacttgtaac
actccactgaagccatcaaacaaacacatgaactctatgtcacatctgcgtcttcggaca
ggcacaactaattctcagggaagttcctga
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