KEGG   Aphelocoma coerulescens (scrub jay): 138101002
Entry
138101002         CDS       T10543                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
  KO
K06752  MHC class II antigen
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04145  Phagosome
acoe04514  Cell adhesion molecules
acoe04672  Intestinal immune network for IgA production
acoe05164  Influenza A
acoe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    138101002
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138101002
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    138101002
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    138101002
   05168 Herpes simplex virus 1 infection
    138101002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoe04147]
    138101002
Exosome [BR:acoe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138101002
  Exosomal proteins of epithelial cells
   138101002
  Exosomal proteins of breast milk
   138101002
SSDB
Motif
Pfam: C1-set
Other DBs
NCBI-GeneID: 138101002
NCBI-ProteinID: XP_068854946
LinkDB
Position
Unknown
AA seq 250 aa
MGGFGGLVATLLWGVLVAVAFGDPAPDPPSHLLAEVLTCQPDSPSRSLSVTLDAQLLYTF
DFPGSRWNPGIPSLPPWPPALETPQEILPEAQLCQEILQNISRVFTGLLPEARGIPMVSV
FPALPPVPGEPNTLVCLVENIFPPALDISWTLAGVPVTQGVTHSPYTPTAELTFVRFSYV
PFVPAAGDVHACVVTSRRDNASVVTYWVAPDAALDEQLEAALAGAATALGIVLALLGVIL
ALVAWRGRGG
NT seq 753 nt   +upstreamnt  +downstreamnt
atggggggcttcggggggctcgtggccacgctactctggggggttttggtcgctgtcgcc
ttcggtgaccccgccccggaccctccctctcacctcctggccgaggtcctgacgtgccag
ccggactctccctctcgctcgctctcggtcactctggacgctcagctgctctacaccttc
gacttcccgggatcccgctggaatcccggcatcccctcgctgcccccctggcccccggcg
ctggagaccccccaggagatccttccggaggcccaactgtgccaggagatcctgcagaac
atcagccgggtgttcaccgggctcctgcccgaggccaggggaatcccgatggtctccgtc
ttcccggctctcccgccggttccgggcgaacccaacaccttggtgtgcctggtggagaac
atcttccctccggcgctggacatcagctggacgctggccggagtgccggtcactcaaggg
gtcactcacagcccctacacccccacggccgagctgacctttgtccggttttcctacgtc
cccttcgttccggccgccggcgacgtccacgcctgcgtggtcacctcgaggagggacaac
gccagcgtggtgacctattgggtggctccggacgcggcgctggacgagcagctggaggcg
gcgctggccggagctgccacggccttgggaattgtcctggcgctgctcggggtcatcctg
gccttggtggcttggaggggtagagggggttga

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