Aphelocoma coerulescens (scrub jay): 138103003
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Entry
138103003 CDS
T10543
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138103003 (NR1H4)
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
138103003 (NR1H4)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
138103003
NCBI-ProteinID:
XP_068857007
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Position
1A:50128866..50172775
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AA seq
477 aa
AA seq
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MGSEMNLIGHHQLATADGFPLAEGPHLFGVLSEPMSSPVQEADVSPYAQYNNVPFPQVQP
QISSPPYYSNLGFYPPQHEEWYSPAMYELRRLPSETFFTRETEIMDIPAAKRPRLGHSTG
RVKGDELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKC
QECRLRKCKQMGMLAECMYTGLLTEIQCKSKRLRKNVKQPPDHTLDEDNEGHDVKQVTST
TKIYREKVEFTPEQQKLLNYIMDSYSKQKIPQEVSKKLLNEEFSAEGNFLILTEMATSHV
QVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSRKLPTGHTFLLEERIRNS
GISDEFITPMFNFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDRDSVERLQEPLLDIL
QKVCKLHHPDNPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggatctgaaatgaatttaataggacatcatcagctagccacagctgatggatttcct
cttgctgaaggtcctcatttgtttggtgtcctttcagaaccaatgagttctccagtgcaa
gaggcagatgtgtcaccttatgcacagtacaacaatgtgccatttccccaagttcagcct
cagatctcatcgccaccttattactccaatttgggcttctaccctccacaacatgaggaa
tggtattcccctgcgatgtacgaactcaggaggttaccctcagagacctttttcacaagg
gagacagagataatggatatccctgcagccaaaaggcctagactgggtcactccacagga
agagtgaaaggagatgagctctgtgtggtctgcggtgacaaagcctctgggtaccactac
aatgcccttacttgtgaaggatgcaaaggattcttcaggagaagcatcacaaaaaatgca
gtatacaagtgtaaaaatggaggcaactgcgagatggacatgtacatgaggagaaaatgc
caggagtgccgtctaaggaaatgcaagcaaatgggcatgttggctgaatgtatgtataca
ggtctcttaacagagatacagtgcaagtcaaaaaggctacggaaaaatgtgaagcagccc
ccagatcatacactcgatgaagacaatgaaggccatgatgtgaaacaagtaacatctaca
actaaaatatatagggagaaggtagaatttaccccagaacagcagaaacttcttaattat
attatggattcatacagtaaacaaaaaataccacaggaggtgtcaaaaaaactattaaac
gaggaattcagtgctgaaggaaattttctgattttaacagaaatggctaccagtcatgtg
caggttcttgtggaattcactaaaaaactaccaggcttccaaacccttgatcatgaagac
cagattgctttgctgaagggctcagcagtagaagcaatgttcctccgttcagctgagatc
ttcagcaggaaacttcctacgggacatactttccttttagaagaaagaattcgcaatagt
ggtatctcagatgaattcataactcccatgtttaatttttataaaagcattggagagctg
aagatgacacaggaggaatatgcactgctcacagccatagttatcctgtctccagatcga
caatacataaaggacagagattctgtggaaaggcttcaagaaccactactggatattcta
caaaaagtctgcaaacttcaccatccagataaccctcaacactttgcatgtcttctgggt
cgtctcacagaattacggacatttaaccatcatcacgcagagatgttgatgtcatggaga
gtgaatgatcacaaattcacacctcttctctgtgagatctgggatgtgcagtga
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