Aphelocoma coerulescens (scrub jay): 138103143
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Entry
138103143 CDS
T10543
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04137
Mitophagy - animal
acoe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138103143 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138103143 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138103143 (VCP)
03009 Ribosome biogenesis [BR:
acoe03009
]
138103143 (VCP)
04131 Membrane trafficking [BR:
acoe04131
]
138103143 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138103143 (VCP)
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
138103143 (VCP)
Ribosome biogenesis [BR:
acoe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
138103143 (VCP)
Membrane trafficking [BR:
acoe04131
]
SNARE
SNARE associated proteins
Others
138103143 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138103143 (VCP)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138103143 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
138103143
NCBI-ProteinID:
XP_068857286
LinkDB
All DBs
Position
Z
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatctgactctaaagccgatgacttgtcgactgctattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaagatggatgaactgcagctgttcagaggagacactgtcctgctcaaa
ggaaagaagaggagagaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgcaacaacctgagagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaaatatggcaaacgtatccacgtgctgccaattgat
gacacggtagaagggatcacagggaatctgtttgaggtctatctcaagccctacttcctg
gaagcttacagacctatcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagatccaagcccgtactgcatagtggctccggacaca
gtgatccattgtgagggagagcccatcaaacgagaggatgaagaggagtcgctgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gagcttcccctccgacaccctgctctcttcaaggccataggggtgaagcctccacgtggg
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaat
gaaacgggagctttcttcttcctgatcaacggtcctgagatcatgagcaagctggctggt
gaatctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcctgcgatc
atcttcattgatgaactggatgccattgctcctaagagagagaagacacacggggaggtg
gaacgtcgcatcgtgtcccagctgctgaccctcatggacgggctgaagcagagggcacat
gtgatcgtgatggcagccaccaacagacccaacagcattgacccagcgctccggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgctaccgggcgcctggaaatc
ctgcagatccacacaaaaaatatgaaactggctgatgatgtggatctggaacaggtggca
aacgagacccatggccatgttggtgctgacttggctgctctctgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctggaagatgaaaccatcgatgctgaa
gtgatgaactctctggctgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttcgggagactgtggtggaggtgccacaagttacctgggaagatattggt
ggcctagaagatgtgaagagagaactccaggagcttgtacagtatcctgtggagcaccca
gacaagttcctcaaatttggcatgaccccatcaaaaggtgttctgttctatgggccacct
ggttgtggtaagacactgctggccaaagccattgccaacgaatgccaggcaaacttcatt
tccatcaaggggccggaactgctcaccatgtggtttggtgagtctgaagccaacgtgcgc
gagatctttgacaaggctcgccaagcagccccgtgtgtgctgttctttgatgagctggac
tccatcgccaaggcccgaggtgggaatatcggcgacggcggcggtgctgcagatcgtgtc
atcaaccagatcctgactgagatggatggcatgtccactaagaaaaacgtcttcatcatc
ggtgccaccaacaggccagacatcattgacccagccatcctgcgccccggccgcctggat
cagctcatctacatccccctgcctgacgagaagtcacgggttgcgatccttaaggccaat
ctgaggaaatcaccagttgccaaggatgtcgacctggatttcctggctaagatgaccaat
ggcttctcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccattcgc
gaatccatcgagagtgagatcaggcgagagcgtgagaggcagaccaacccttctgccatg
gaggtggaggaggacgacccggttcctgagatccgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagcgacaatgacatcaggaaatacgagatgtttgcacag
accctacagcaaagccgtggctttggcagcttcaggttcccgtcaggcaaccagggcggc
gccggtccgagccaaggcacaggaggtggcagcgggggcaacgtgtacagcgaagacaat
gacgacgatctctacggttaa
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