Aphelocoma coerulescens (scrub jay): 138103149
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Entry
138103149 CDS
T10543
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00310
Lysine degradation
acoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138103149 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138103149 (PRDM6)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138103149 (PRDM6)
Enzymes [BR:
acoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
138103149 (PRDM6)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
138103149 (PRDM6)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
138103149 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
138103149
NCBI-ProteinID:
XP_068857298
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All DBs
Position
Z
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AA seq
573 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGPLAQLQPPERAEPSADSLRQRPT
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTSLPVTQLPVFGPLQSSELPAGGAPAP
LQGKDLCGAGSGGGKCGDRGAARYRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGI
CAAQRIQQGTWIGPFQGILLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSW
MRYIRCARHCGEQNLTVVQYRSNIFYRACVDIPRGTELLVWYNDSYTSFFGIPLQCIAQD
ENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESG
FNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQ
CGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERC
ERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgaccccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagcagccagctaaaaagcagcgggcccctcgcc
cagctccagccgcccgagagagccgagccctcggctgacagcctccgccagcgcccgacc
tccctctcctccgcctcctcctcctcttcttcgtccactccgtcttcctcctccacctcc
tcgtgcgtggctgctgcggccgcttccctggctggcctgacctccctgcctgtgacccag
ctccctgtcttcggcccgctgcagagctcggagctcccggccgggggagcgcccgctccc
ctgcagggcaaggatttgtgcggggccggcagcggcggcggcaaatgcggcgaccgtggt
gccgctcggtaccgatgcacggccgaggagctggactactacctgtacgggcagcagcgc
atggagatcatccccctgaaccagcacaccagcgaccccaacaaccggtgtgacatgtgt
gctgataaccgcaacggcgagtgccctatgcatgggcccctgcactccctgcgccggctg
gtgggcaccagcagcgcggccgcggcagcccctccgcctgagatcccggagtggctccgg
gacctgccccgggaagtgtgtctgtgcaccagcacagtgcctggcctggcctatggcatt
tgtgcggcacaacggatccagcagggcacctggattgggcccttccagggaattttgctc
ttgccagagaaggttcaagcaggtgccatcaggaacactcagcatctctgggaaatatat
gaccaagatgggacactgcagcactttatcgatggtggagaacccagtaagtcaagctgg
atgaggtacatccgatgtgcaaggcactgtggggaacagaacttaacagtggttcagtac
aggtcaaatatattctaccgggcttgtgtagatatccccaggggcactgagctgttggtg
tggtacaatgacagctacacatctttctttggaatccctctccagtgcattgcacaagat
gagaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtagcaaactatcccctgccactccacagcgatccgtagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacgcagaaccccgacaggccctaccag
tgcggtcactgctcccagtctttctcccagccctcagagctgaggaaccacgtcgttacg
cactccagcgacaggcctttcaagtgtggctactgcgggcgtgcctttgctggtgccaca
acactcaacaatcacatccggacacacacgggggaaaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
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