Aphelocoma coerulescens (scrub jay): 138104957
Help
Entry
138104957 CDS
T10543
Symbol
DSEL
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
acoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
138104957 (DSEL)
Enzymes [BR:
acoe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
138104957 (DSEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
TPX2
Beta_helix
Motif
Other DBs
NCBI-GeneID:
138104957
NCBI-ProteinID:
XP_068860466
LinkDB
All DBs
Position
2:111084311..111094336
Genome browser
AA seq
1216 aa
AA seq
DB search
MALMFTGHTLFLALMMFDVFTFEESVSNYSDWVTFIENVDQYKNQQLEGFSAEQKLKRTV
LHPSLYFDAQDVQALRQKARTSHLHLFRAIRSAVMVMLSNPLYYLPPPKHVDFAAKWNEI
YGNNLPPLAFYCLLCPEDKAAFDFALEYMDRMAGYKNWLVENAPGDEVPLGHSLTGFATA
FDFLYNSLENKRRQKYLEKIWSVSEEMYEYSKVRSWGKQLLHNHQATNMLALLIGALVAG
VDKGSQANIWKHTVVDMMEKTMFLLNHIVDGSLDEGVAYGSYTAKSVTQYVFLAQRHFGI
NNLENNWLKMHFWFYYATLLPGFQRTVGVADSNYNWFYGPESQLVFLDKFIMKNGAGNWL
AQQIRKHRPKDGPMVPSTAQRWSTLHTEFIWYAAEITPHPPPDYGTAKMHVFPNWGVVTY
GAGLPNSQTNTFVSFKSGKLGGRAVYDIVHFQPYRWIDGWRSFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKLSHLNNVLVFAPSPTSQCNQPWEGQLGECAQWLRWIGDEVGDSTGEI
ITASQAGDMMFVSGEAVSAYTSAMKLKSVYRILLLLNSQTLLVVDHIEKEEDSPVNSVSA
FFHNLDIDFKYIPYKFKNKYNGAMMDVWDAHYKMFWFDHHGSSPVARIQEAEQAAEFKKR
WTQFVNVTFPMKSTLTRIVYLFYGPYVNVSNCRLMDNAKSGFQISLSVNNTENTISVVTE
YQNLKARFDYLGFGGFAKVVHENKVTKFGLGTESVKKEMKNKRVVFPFGFKVNIIAGLIL
GVSLVILAFQWRFYISFGKMLRWILILVVTLWLTELVDVWSMCTQPICAKWSSDMTRLER
DKGNKARQLEGNPIVLPDVIITSLPTSGAEILKQLFFNTSDFLYIRIPTPYLEIPETEFE
IDSFVDPCEWKVSDVQKGNFHLIQGWLQSLVRDTKLHLQNIHLYEASRSKIAQHPALSKD
KKKRSKKRESLSEQRSRARGSQEKDAEYIRELRRHLVYYPNARPVLSLSSGSWTLKLPFF
QGILGPSMRALYVVRDPRAWIYSMLYKNKPSLYSLKNIPQHLAAMFQGENGKEKCSLNEG
YASEFESLRKEISNSNSNAISVLSYLWLANTEAAMRINRDLLPTNYQLVKFEDIVSFPQK
TAETIFAFLGIPLPPASLNQILFATSTSLFYLPYEGEISPSSIHAWKQNMPHEEIRQIED
ICCSLMDHLGYPKFIE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatgtttacggggcatactttatttctagcattaatgatgtttgatgtcttc
acttttgaagaatctgtaagcaattactctgattgggtgacattcatagaaaatgtagat
caatataaaaaccagcaacttgaaggttttagtgctgagcagaagctgaaaagaacagtt
cttcatccaagcttgtattttgatgctcaggatgttcaggcactgaggcagaaggctcgt
acaagccatttgcatctcttcagagccatcagaagtgcggtgatggttatgctgtccaat
cctttatactacctacctccacccaagcacgttgattttgcagccaagtggaatgagatt
tatggtaacaacctgccacctctagcgttctactgtttgctgtgccccgaagataaagct
gcatttgattttgccctagaatatatggatagaatggctggctacaaaaactggttggtt
gagaatgcacctggagatgaggtgccacttggtcactccctaacaggatttgccactgct
tttgacttcttgtataattcactggaaaataagagaagacaaaaatacctggagaagata
tggtctgtaagtgaggaaatgtatgagtactccaaggttcgttcctggggaaagcagctt
ctccataatcaccaggcaaccaatatgcttgctttgcttattggggctttagttgcagga
gtggacaaaggatctcaggcaaatatttggaaacacactgttgttgatatgatggagaaa
acaatgtttctgctcaatcacattgtagatgggtctctggatgagggagtagcttacggg
agttacacagccaagtcagtaacccagtatgttttcctggcccaacgccacttcggtatt
aacaacttggagaataactggctgaaaatgcacttctggttttactatgccaccctattg
ccaggattccagaggactgtgggtgttgcagattctaattacaactggttttatggtcct
gagagccaactggttttcttggataagttcatcatgaagaatggagctggtaactggctg
gcacagcaaattagaaaacacagacccaaggacgggccaatggtgccatccacggcacag
aggtggagcacattacatactgaatttatatggtatgctgctgaaatcactcctcatccc
cctcctgactatggtactgctaaaatgcatgtgtttcctaactggggagttgttacttac
ggggctgggttgccaaacagtcagacaaacacctttgtatccttcaagtctggaaaactc
ggtggacgtgctgtctatgatatcgttcactttcagccctatagatggattgatgggtgg
agaagtttcaatccgggacatgaacatcctgatcagaactccttcacttttgctcccaat
ggtcaggtgtttgtatctgaggctctttatggacctaaactgagccacctgaacaatgtc
ttggtctttgctccatctcctacaagccagtgcaaccagccttgggaaggacagcttgga
gagtgtgcccagtggctgaggtggattggtgacgaggttggagactcaactggagaaatt
ataacagcctcccaggctggtgacatgatgtttgtgagtggtgaggcggtatctgcttac
acgtcagcaatgaaactgaaaagtgtgtatcgcattttgctgctcttaaattctcagaca
ttgttagtagttgaccatatcgagaaggaggaagactctcctgttaattcagtcagtgcc
ttttttcataatcttgacattgattttaaatacataccctataagtttaagaacaagtac
aatggagctatgatggatgtgtgggatgcccactacaagatgttttggtttgatcatcat
gggagtagtcctgttgctaggatacaggaggctgaacaagctgctgaattcaaaaagcga
tggactcagtttgtaaatgttacctttccgatgaaaagcacgcttacaaggattgtttac
cttttctatggcccgtatgtcaatgtctctaactgtagactcatggataatgccaaatct
ggatttcagatttcgctcagtgtcaacaacactgaaaataccatctctgttgtgactgag
tatcagaatttaaaggcaaggtttgattacttgggatttggtggttttgctaaagtagtt
catgaaaataaagtgaccaagtttggtctcggtactgaatctgtaaaaaaagagatgaaa
aataaaagggtagtttttccttttggattcaaagtgaacataattgcagggttaattttg
ggtgtcagtttggtcatactggcttttcagtggcggttttacatatccttcggtaaaatg
ttgcgttggatcctgatactggttgtcacactgtggctcactgaattggtggatgtgtgg
agcatgtgtactcagcccatctgtgcaaagtggagcagtgacatgacaaggctagaacgt
gataaaggcaataaagccagacaattagaaggaaaccccattgttttgccagatgttatc
attacttcacttcccacttctggtgcagaaattttaaaacagctgtttttcaataccagt
gattttttatacatcaggatacctacaccctatcttgaaattcctgagactgaatttgaa
attgattcttttgtagatccatgtgaatggaaggtttctgatgtccagaaaggtaatttt
catcttatccaagggtggcttcagtctctagttcgagacacaaagttgcatttacaaaac
attcatttatatgaagctagcagaagtaaaattgctcagcatcctgcattaagcaaagac
aaaaagaaaaggtccaaaaagagagaatccctgtcagagcaaagaagcagggcaagaggg
agtcaagaaaaagatgctgaatatataagggaactgagaagacatctcgtctattatccc
aatgcacgacctgtgcttagtttaagcagtgggagctggacattaaagcttcccttcttt
cagggaatcttaggaccatcaatgagagcattatatgtagtgagggacccacgggcatgg
atctattcaatgttgtacaaaaataagccaagcctttactccttgaaaaatattccacaa
cacttggctgcgatgtttcaaggggagaatggtaaagaaaaatgtagtttgaatgaaggc
tatgcctctgagtttgaatcactaagaaaagaaatttcaaattctaattcaaatgctatt
tctgtgttgtcttatttatggctagcaaacacagaagcagcaatgagaataaacagggac
ttgctgccaacaaattatcagctggtcaagtttgaagatattgtgagctttcctcagaag
acggctgaaactatttttgcctttcttggtattcctcttcctcctgctagcttaaaccaa
atattatttgccacctccaccagtcttttctatcttccttatgaaggggaaatttcacca
agtagcattcatgcctggaaacaaaacatgccccatgaagagattagacagattgaagat
atctgttgttcactgatggaccacttaggatacccaaagtttatagaataa
DBGET
integrated database retrieval system
