Aphelocoma coerulescens (scrub jay): 138106921
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Entry
138106921 CDS
T10543
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138106921 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
acoe04050
]
138106921 (TNFRSF11A)
04090 CD molecules [BR:
acoe04090
]
138106921 (TNFRSF11A)
Cytokine receptors [BR:
acoe04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
138106921 (TNFRSF11A)
CD molecules [BR:
acoe04090
]
Proteins
138106921 (TNFRSF11A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
CrgA
AI-2E_transport
COX2_TM
RELT
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
138106921
NCBI-ProteinID:
XP_068864387
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Position
2:complement(81911880..81940302)
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AA seq
664 aa
AA seq
DB search
MPVPSGCWLLLLCLAAAGKQLSLQITPPCESEQHYEYSGRCCRKCEPGKYLSARCTATSD
SVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALKEVNPGNSTFQRQCACTMGYHWNEDCD
CCQRNTMCAPGLGVKPPVQQDKDTMCIPCPRGYFSDVSSSTDECKSWTNCTALGMEESTP
GTDKSDAVCKERKMPEPSEDGTNRILYVLIVILFFVTLIGIVVFIVYYKKKGKKLTADLQ
NWANEVCSQIKGTKEPPRDAFVTVNITNAAVPQTSEDTCLLGPSGSPVPGNLCCTSGHTP
CRKESPSTEPCEAGDFSVVTETDDYQFPPVPTEDEYMDKDLNNTDYLSLLSRTASKTVSS
FSEPMEAGENDSLNQYFSGIGSTEDISVSQGFHPPSNTDGAYITTDQLLQKSCQHAYSCL
KETGNKDTDHFATNCDSEKICARCGILYRESPQKCSKPCCAVADSTSTSPETGSFAQCTC
GLNFLSAGQSTLANDLGMEDASSDTTNMKHQNTNRSTSGTHRSTSGTNSNTSDLPPASGN
VTGNSNSTFISSGQVMNFKGDIIVVYLSQNSQEGATASGPSEENVGSPVQEENLSRCETF
AGNAQHYKEKCAELQGAHPAAGSGGPRWPGGALAQERGPSCGGQASQPVQEEGKLGHFSE
KVLN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgtcaggctgctggctccttctcctgtgcctcgctgccgctggcaaacag
ttgtcactacaaatcactccaccatgtgaaagtgaacaacactatgagtactctggacgg
tgctgcaggaagtgtgagccagggaagtatttgtctgctagatgcactgctacttctgat
agcgtgtgccagccatgtggcccaaacgagtatatggatgtctggaatgaagaagataaa
tgcctgctacataaaatatgtgatcaagggaaagccttgaaagaagtgaacccagggaac
agcacgttccagcggcagtgtgcttgtacgatgggctaccactggaatgaggactgcgac
tgctgtcagcggaataccatgtgtgctcccggcctcggagtcaagcctcctgtgcaacaa
gacaaggacacaatgtgcataccatgtcccagaggctacttctcagatgtctcttcatcc
actgacgagtgtaaatcctggaccaactgtacagctctaggaatggaagaaagcacgcct
gggactgacaagtctgatgcagtttgtaaagaacggaagatgcctgagccatcagaagat
ggaacaaacaggatcttatacgtgttgattgtcatcttgttttttgtgacactaattggc
attgtcgtcttcatcgtgtactacaagaagaaggggaaaaagctgacagcagatctacag
aactgggctaatgaagtgtgcagccaaataaaaggaacaaaggaaccccccagagatgct
tttgttactgtgaacatcacgaatgctgctgtcccccagacctctgaagacacgtgtctc
ctgggcccctctggctctcctgtccctggaaacttgtgctgcacctctggtcacactcct
tgcaggaaagagagccccagcacagagccttgtgaggcaggagacttttctgtggtaacc
gagactgatgattaccaattcccaccagttcccacggaagatgaatacatggataaggat
ctcaataacactgattatttatctttactaagtcggactgccagtaaaactgtgtcgtca
ttttcagaaccaatggaggcaggggagaatgacagcttgaaccagtacttttcaggtatt
gggagcacagaggacatatcagtctctcaaggctttcaccctccctccaacacagatggg
gcatacattaccacagaccaacttcttcagaaatcttgccaacatgcctacagttgcctg
aaggaaacaggcaacaaggacacagatcattttgcaacaaactgtgactcagagaagatc
tgtgcgaggtgtggcattttgtatagagaatctccccaaaagtgtagcaaaccctgttgt
gctgtggctgacagcacctccacctccccagaaactggttcctttgcacagtgcacctgt
ggtttgaattttctctctgctggtcagagcactctagcaaacgatcttggtatggaagat
gcatcttcagatactaccaacatgaaacaccagaacacgaacagaagcacttcagggaca
cacagaagcacttcagggacaaacagcaacacttcagacctccctccagcatctggaaat
gtgactggaaacagtaactccacctttatttcaagtggacaagtaatgaatttcaagggc
gacatcattgttgtctaccttagccaaaactctcaggagggggcaacggcctcggggccg
agcgaggagaacgtgggcagccccgtgcaggaggagaacctcagccgctgtgagactttt
gccggcaatgcccagcactacaaggagaagtgtgcggagctgcagggcgcccacccggcg
gcggggagcggggggccacgatggcctggtggagccctcgcccaggagcggggcccatcc
tgtggtggacaagcctcccagcccgtgcaggaggaggggaagctgggacacttctcggag
aaggtgttgaactga
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