KEGG   Aphelocoma coerulescens (scrub jay): 138109016
Entry
138109016         CDS       T10543                                 
Name
(RefSeq) toll-like receptor 2 type-2
  KO
K10159  toll-like receptor 2
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04145  Phagosome
acoe04620  Toll-like receptor signaling pathway
acoe05132  Salmonella infection
acoe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138109016
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    138109016
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138109016
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138109016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoe04131]
    138109016
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoe04147]
    138109016
   04054 Pattern recognition receptors [BR:acoe04054]
    138109016
   04090 CD molecules [BR:acoe04090]
    138109016
   00536 Glycosaminoglycan binding proteins [BR:acoe00536]
    138109016
Membrane trafficking [BR:acoe04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    138109016
Exosome [BR:acoe04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   138109016
Pattern recognition receptors [BR:acoe04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   138109016
CD molecules [BR:acoe04090]
 Proteins
  138109016
Glycosaminoglycan binding proteins [BR:acoe00536]
 Hyaluronan
  Cell surface receptors
   138109016
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR LRR_1 TIR_2 LRR_9 LRR_Zer-1 LRR_NXF1-5 DUF7472
Other DBs
NCBI-GeneID: 138109016
NCBI-ProteinID: XP_068868216
LinkDB
Position
4:34059877..34065964
AA seq 783 aa
MTTHTWRVLAIYMILAVNLSEQQALKQACPSCSTSQLCNCSSMGLDFVPLGLTAKITVLD
LAHNRIKHIRSPDLQQAVNLRVLQLQSNKISSIDEDSFQSLAKLELLDLSNNSLAHVSPV
WFGHLFSLQHLYLQGNSYRDLGESSPFSSLRNLSSLHLGSPQFSGIRQGNFEGIELLHKL
WIDGSNLSQYEQGSLKSIKKINHMIINIRSINVFSDIVRDLLHSVAWLEVRRIAFSIPAE
MQLLRVMSSSFAKKISFRQTLLTDATVPELVSILEDMPKLVELELVDCRLLGTGQWKIQI
QAKQSQTLTVFTIEKLSIEEFYLFTDLQAVEGLISLFRRVTVQNTKVFLVPCRISQCLRS
LEYLDLSSNLLGDQSLEHSACQGGWPSLQTLNLSRNSLSDLEMTSKSLSHLGNLIVLDIS
QNNFGEIPDRCVWPKALKYLNLSSTQIPKVTACIPRTLEVLDVSANNLKEFALQLPLLKE
LYLTKNQLMALPGATPIPNLVALSVRSNKLNSFSKEEFESFKRMELLDASGNNFICSCEF
LSFVHHEARIAQVLVGWPDEYVCDSPLAVRGAQVGAVHLSLMECHRSLVVSLICVLVFLV
ILLLVAVGYKYHVVWYMRMTWAWLQAKRKPKRAPPKDVCYDAFVSYSENDSDWVENTMVQ
ELEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSRKTLFVLSEHFVQSEWCKYELDFSH
FRLFDENNDAAILILLEPIQSKAIPKRFCKLRKIMNTKTYLEWPAGEEQQQVFWFNLKIA
LRS
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgactacacacacctggcgagtgttggccatctacatgatcttagctgtaaacctctcc
gaacagcaagcgctgaagcaggcttgtccttcatgcagtaccagtcagctttgcaactgc
tcttccatgggcttggacttcgttcccctgggactcacggccaaaatcacagtattagac
ctggcccacaacaggataaagcacatccgatccccggacctgcagcaggctgtgaacctg
agagtcctgcagctgcagtccaacaaaatcagctccatagatgaggactcgtttcagtcc
ctggcaaaactggagctcttggacttatcaaataacagcttggctcacgtgtcccctgtg
tggtttgggcaccttttttcactccagcacctctacctgcaaggcaattcctacagagac
ctgggggagagctcccccttttctagcctgaggaacctgagctctctccacctgggcagc
ccgcagttctctgggataaggcaagggaactttgagggcattgagcttctgcacaagttg
tggattgatggtagcaatctcagtcagtatgagcaaggaagtttgaaatcaattaagaag
ataaatcacatgatcataaacataagaagtattaatgtattctcagacattgttagggac
cttctgcactctgtcgcttggctggaagtcagaagaatagcattcagtatccctgcagaa
atgcaactattgagagtcatgtcttcgtcctttgcaaagaaaatttcttttagacagacc
ttattaacagatgctaccgtgcctgagcttgtcagcattttagaagacatgccaaaacta
gtagagctggagctggtagactgtagactcttgggaactggacaatggaaaatacaaatt
caagcaaagcaatcacagacccttacagttttcacaatagagaaattatctatagaggaa
ttttacttgtttacagatcttcaggctgtggaaggtctaatatctctttttaggagagtc
acagttcaaaacaccaaggtctttttggtaccatgcagaatttcccaatgtcttcggtca
ttagaatatcttgaccttagttcaaatctgcttggagaccagagtttagaacattcagct
tgtcagggtggttggccatccctacaaactctaaatttaagtaggaattcactgagtgac
ttagaaatgacaagtaaaagtttgtctcatctaggaaacctaattgttttagacattagc
caaaataattttggtgagattccagataggtgtgtatggcccaaagccctgaaatattta
aacctctccagcactcaaattcctaaagtaacagcctgcattcctcgaacgctggaagtt
ttggatgttagtgcaaataacctgaaggagtttgcactgcagctcccattactgaaagag
ctgtacctcacaaaaaaccagctgatggccctgcctggtgccacacccattccaaactta
gtggccttgtccgtcagaagtaacaagctgaacagtttctccaaggaggagtttgagtcc
ttcaagagaatggagctgctggatgccagtggcaacaacttcatctgctcctgtgagttc
ctctcctttgtccaccacgaggccaggatagcccaggtgctggtggggtggccggacgag
tacgtgtgtgactctccgctggcggtgagaggggcgcaggttggcgccgtgcacctgtcc
ctgatggagtgccacaggtccctggtggtgtcattgatctgtgtcctggtgttcctggtc
atcctgctgctggtggccgtcggctacaagtaccacgtggtctggtacatgcggatgacg
tgggcatggctgcaagccaagcggaagcccaagcgagccccgcccaaggacgtctgctac
gacgcttttgtctcctacagcgagaacgactccgactgggtggagaacaccatggtgcag
gagctggagcaggcctgccctccctttcggctctgcctgcacaagcgggactttgtgccc
gggaagtggattgtggacaacatcatcgactccattgagaagagccgcaaaacgctcttt
gtgctgtccgagcactttgtgcagagcgagtggtgcaagtacgagctggacttctcgcat
ttccgcctctttgatgagaacaacgacgcggcgattctcatcctcctggagcccatccag
agcaaagccattcccaagaggttctgcaagctgcggaagatcatgaacacaaagacctac
ctggagtggcccgctggtgaagagcagcagcaggtgttttggtttaatttgaaaatagct
ctaagatcttag

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