Aphelocoma coerulescens (scrub jay): 138110249
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Entry
138110249 CDS
T10543
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138110249 (TRPC6)
Ion channels [BR:
acoe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138110249 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Phage_holin_3_6
Motif
Other DBs
NCBI-GeneID:
138110249
NCBI-ProteinID:
XP_068871060
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Position
1:80429041..80510262
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AA seq
895 aa
AA seq
DB search
MSQAQPYAPRKGSSPAPGARRNDSQDYLLLDAEVCEESALPPYAFYPVRGNENRLALRRQ
TILREKGRRQASRGPAYMFNDHSTSLSLEEERFLDAAEYGNIPVVRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAEG
KRLALSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPH
DYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLAN
IEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNNGEHGRPSLSRLKL
AIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAP
CSKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTDNVKQLFRMKTS
CFSWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFW
HASRAQNIVDANMKDLTSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIA
YILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTV
EESFKTLFWAIFGLSEVKSVVINYKHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSF
QEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLIKIKKCISKPFLCQ
KKSFQEDAEMNKLGQRKQSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKES
DEVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSIDSKEEESKR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcgcagccctacgccccgcgcaagggcagctccccggcgcccggggcccgg
cggaacgacagccaggactacctgctgctggacgcggaggtgtgcgaggagagcgccctg
ccgccctacgccttctaccccgtccgaggcaacgagaacaggctggcactgcggcggcag
accattctccgggagaagggcaggaggcaggccagccgggggccagcctacatgttcaat
gaccactccacaagcctttctctggaggaggagcgctttctggatgcagcagagtatgga
aatattccagtggtccgcaaaatgctggaagaatgtccctcactcaatgtgaactgtgtg
gactacatgggacagaacgccttgcagctggcagtggccaatgagcacctggagattacc
gagctcctgctgaagaaggagaacctggcccgggtgggggatgccttgcttttggccatt
agcaaaggctacgttcggatagtggaagccatcctgagccaccccgcgtttgccgaaggc
aagaggctcgccctgagtcccagccagtcggagctccagcacgatgacttctacgcgtac
gatgaggacggcacgcgcttctcccatgatgtcacaccaatcattctggctgctcactgc
cacgagtacgagatcgtgcacaccctgctgcggaaaggagctcggattgataggccccat
gactatttctgcaagtgcagtgagtgcaatcagaaacaaaagcatgactctttcagccac
tctagatccaggatcaatgcctacaaaggtctggccagccctgcttatctgtctttgtcc
agtgaagaccctgtcatgactgccttagagctcagcaatgagctggccgtgcttgccaac
attgaaaaagagttcaagaatgattacaagaaactgtctatgcaatgcaaagattttgta
gttggactgcttgatttgtgcagaaatacagaagaagtggaagctattttgaatggtgac
gtagagatgagccataataatggagagcatggtcgccccagcctcagccgcttaaaactc
gccatcaagtatgaagttaaaaaattcgtagcacatccaaactgccagcagcaactgctc
tcgatctggtacgagaatttgtcgggtttgcggcagcagacgatggcagtgaagtttctg
gttgtcctcgcggttgcagtcggacttcccttcctttccatggcctattggattgctcct
tgcagcaagctggggaggataatgcgtggaccatttatgaagtttgtagcccatgcagcc
tctttcaccatttttctcggtctgcttgtcatgaatgcagctgacaggtttgacggcacc
aaactccgacctaatgaaacaacagacaatgtaaaacagctttttaggatgaaaacatcc
tgtttctcatggatggagatgctcattatttcttgggtaataggcatgatatggtctgaa
tgtaaagaaatttggtctcaaggtccaaaggaatacctgtttgagttatggaatatgctt
gattttggtatgttagcaatttttgcagcatcattcatagcaaggtttatggcattttgg
catgcatccagagcccagaacatcgttgatgcaaatatgaaagatctgacaagtccaaca
ctggagcccaacataaaatactacaccttggccagaataaactgggatccgtctgatcct
cagataatttctgaagggctatatgcaattgcagtggtgttaagtttctcacggatagcc
tacatcttaccagctaatgaaagctttggaccactgcagatatcacttgggagaaccgtg
aaagacatcttcaagtttatggtgatatttatcatggtgtttgtggctttcatgataggc
atgttcaatctctattcctactatctgggggcaaaacagaatgaagcgttcacaactgtt
gaagaaagtttcaaaacattgttctgggctatatttggactctcagaagttaaatcagtt
gtgatcaattataaacacaaatttattgaaaatattggttatgttctttatggagtctat
aatgttaccatggtcatcgtcttactgaacatgcttatcgcaatgatcaacagttcattc
caggaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaactttggttt
tcctactttgaagaagggagaactcttccagtgcccttcaacctagtgccaagcccaaaa
tctttgctgtatctcctaatcaaaatcaaaaaatgtatttctaaaccatttttgtgccaa
aagaaaagctttcaggaagatgcagagatgaacaagcttggtcaaaggaagcagtcaagt
ataagaagctcagatgaaatccacttaaacagtttaaacaatcctccaagacaataccag
aaaataatgaagcgtcttattaaaagatacgtgttgaaagctcagatagataaggaaagt
gatgaagtcaatgaaggtgaactgaaggaaattaaacaggacatctcgagtctccggtat
gaactccttgaggaaaaatctcagaattctgaagatctggcagaacttataaggaaactt
ggggaaaaactgtcaattgactctaaggaagaagaaagcaagagataa
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