Aphelocoma coerulescens (scrub jay): 138111108
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Entry
138111108 CDS
T10543
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138111108 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138111108 (KDM2A)
04121 Ubiquitin system [BR:
acoe04121
]
138111108 (KDM2A)
03036 Chromosome and associated proteins [BR:
acoe03036
]
138111108 (KDM2A)
Enzymes [BR:
acoe01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138111108 (KDM2A)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138111108 (KDM2A)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138111108 (KDM2A)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138111108 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138111108 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Ribosomal_60s
LRR_4
Motif
Other DBs
NCBI-GeneID:
138111108
NCBI-ProteinID:
XP_068872432
LinkDB
All DBs
Position
5:complement(2450134..2485289)
Genome browser
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEDDE
DAAGKESRRPVTRRSILTSPIANGANVDYDELGRSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPTPRPTPVRS
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDEDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPARMPLRSGGDEEAA
AEEEEEEEEEEDENAEEGGAARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcctggcgtgtccttctcgctctcttcggaggagtcggagatggagccc
gaggaagaacggatccgttacagccaaagactgcgtggcacgatgaggcggcgttacgag
gacgacggcatctccgatgatgagattgaagggaagaggacgtttgacctcgaggaaaag
ctgtccaccaacaagttcaactccaccttcgtggtcttcatggaaggcaaagacttcaca
gttgagtacatccagcggggtggcctgagggacccacttatcttcaggagctcggacggc
ctggggataaagatgccggatccggacttcagcgtgaacgatgtgcggctgtgtgtgggg
agccgacggatggtggatgtgatggatgtgaacacgcagcgggatatcgagatgtccatg
gcgcagtgggcgcgctactacgaaacgccggaggaggagcgcgagaaactctacaacgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagtcagacagag
tctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgtctgatgagt
gtcaagggctgttacacagatttccacgtggactttggtggcacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacattttccttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctcaggttggatc
cacgctgtgtatactcccatggacacgctggtttttgggggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcatcgaggaccgcacacgggtcccaaataag
tttcgttatcccttctattacgagatgtgttggtacgtgctggagcgctacgtgtactgc
atcaccagccgctcccacctgaccaaggacttccagaaggaatccctcagcatggatatg
gagctgagctcctcggactcggtgaacatggaagaggaggaggaggaggaggatgatgag
gacgcagcagggaaggaatcccggcgccccgtgaccaggaggtccattctcaccagcccc
atcgccaacggtgccaatgtggactatgacgaactgggcaggagctgccggagcagcctg
ccggggctcaagaagaccccatccatagactcttccgactctagccggggctcccaaaat
ggccaggcctgggacccgagcgggggcagcccccgcaagagcaggaaggtgcacctgacc
cagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctccctctgcac
aagaagtgcgttcccaccggcatcgaggacgaggatgccctcatcgctgacgtcaagctg
ctgttggaagaatacgcaaacagcgaccctaaactggcacttacaggcgtccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgcccacc
atccccatcaccaagccgcacaccatgaagccaacgccgcgcccgactcccgtcaggtcc
acggtgtctcccatcgtgtcaggcgcccggcggaggcgggtgcggtgccggaaatgcaag
gcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaagaagttcggc
gggcccggccgcatgaagcagtcctgcgtcctccggcagtgcttggcgcccaggctgcct
cactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcgcaggacttt
gagaagaagctcatggagtgctgtatctgcaatgagatcgttcaccccggctgtctgcag
atggatggggaagggctgctgaacgatgagctccccaactgctgggagtgccccaagtgc
taccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagcgacgaagac
acggctcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacccccccg
cccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccccgcggggtg
gtgacgcgctcgtccccgggggccgggcccagcgaccaccacagcgccagccgggacgag
cgcttcaagcgccggcagctgctgcggctccaggccacggagaggaccatggtgcgggag
aaggagaacaaccccagcggcaagaaggagctgtcggaggtggagaaggccaagctgcac
ggctcctacctcaccgtgacgctccagcgccccaccaaagatgtccacggcacttcgatc
gtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcgccgcgcgtg
gtcgtgcgccacgcgcccgccaggatgcccctgcggagcgggggcgatgaggaggcggcc
gccgaggaagaggaggaggaagaggaggaggaggacgagaacgcggaggaggggggggcg
gcccggctgaacgggcgtgggggccgggcgcaggagggcgaggagagctgcgtccagcgc
gaggtctggatgtccgtgttccgctacctcacccgcagggagctttgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagacttg
agcaggtgcaagtccatcaccccccaggcgctgagcggcatcatcaaaaggcagccggtc
agcctcgacctcagctggaccaatatctcaaaaaaacagcttacatggctcgtcaacagg
ctgccaggcctgaaagacctcatcctggcgggctgttcctggtctgcggtctgcgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacgcctccaacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacggacgccacg
ctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
cacctcacggaccagtcggccaacctcctcaccgccgtgggctcttccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtacctg
cgccgcatctccaacgtcaccctcatcgacctgcggggctgcaaacagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagctgatccaaaaaatcagctag
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integrated database retrieval system
