Aphelocoma coerulescens (scrub jay): 138111452
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Entry
138111452 CDS
T10543
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03320
PPAR signaling pathway
acoe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138111452 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
138111452 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138111452 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
acoe03310
]
138111452 (NR1H3)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138111452 (NR1H3)
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
138111452 (NR1H3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
138111452
NCBI-ProteinID:
XP_068873379
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Position
5:complement(27697285..27729395)
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AA seq
409 aa
AA seq
DB search
MGPTQLSTQDHGKRVASVFEMEEEGLPLFPGSENPPEHAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPPNPPSPSHKLTPEQLSMIKKLV
AAQQQCNQRSFTDRLKVTPWPQIPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccactcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggcttccgctcttccctggctcagagaacccccctgagcatgcagaa
aatccccccttgaagcggaagaagggcccagcccctaagatgctgggaaacgaagtgtgc
agtgtgtgcggggacaaggcctccggcttccactacaacgtgctgagctgcgagggctgc
aagggcttcttccgccgcagcgtcatcaagggcgcgcagtacgtctgcaagaacggcggc
aagtgcgagatggacatgtacatgcgccgcaagtgccaggagtgccggctgcgcaagtgc
caggaggccggcatgcgggagcagtatgttctgtctgaagaacagatccgactgaagaaa
ctgaagaagcaggaagacgatcaggctcggacagttgtggtgcgtccaaaccctccaaat
ccgccaagcccttcccacaaattgacgccggaacagctgagcatgataaaaaagcttgtg
gctgctcagcagcagtgcaaccagcgctccttcacagacaggctcaaagtgacgccatgg
ccccagattcctgatccaaataaccgtgaagcaaggcagcagcgttttgctcactttaca
gaacttgcaattatctctgtgcaagagatcgtggactttgccaagcaattacctggcttc
ctggagctcaccagggaagatcagattgctttactgaagacatctaccatagaggtgatg
ttgttggagacatctcggcgctacaatccagagattgagagcatcacctttctcaaggac
ctgagctataatcgggatgacttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgagttctcaaagggaatgaatgagctacagcttaatgatgctgaatacgcactt
ttaattgccatcaacattttctctgcagaccgaccgaacgtgcaggaccagtccctggtg
gagaggctgcagcacacctatgtggaagcacttcattcttacatttgcatcaacagacca
aatgaccgcttgatgtttccacggatgttaatgaagctggtcagtcttcggacactgagc
agtgtccactctgaacaggtgtttgcccttcggctgcaggacaagaagctcccgcccctg
ctctcagaaatctgggatgtgcatgagtga
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