Aphelocoma coerulescens (scrub jay): 138111597 Help Entry 138111597         CDS       T10543                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism acoe  Aphelocoma coerulescens (scrub jay) Pathway acoe04115   p53 signaling pathway acoe04145   Phagosome acoe04148   Efferocytosis acoe04350   TGF-beta signaling pathway acoe04510   Focal adhesion acoe04512   ECM-receptor interaction acoe04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:acoe00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     138111597 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     138111597 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     138111597 (THBS1)    04148 Efferocytosis     138111597 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     138111597 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     138111597 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     138111597 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:acoe04131]     138111597 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:acoe00536]     138111597 (THBS1) Membrane trafficking [BR:acoe04131]  Endocytosis   Phagocytosis    Opsonins     138111597 (THBS1) Glycosaminoglycan binding proteins [BR:acoe00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138111597 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  138111597 NCBI-ProteinID:  XP_068873778 LinkDB All DBs Position 5:complement(35010506..35026341) Genome browser AA seq 1177 aa AA seqDB search MGPATALCLLLLVLGGSETKRTAESRSDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGS GHVFSLVSNGKAGSLDLSLSGDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVEMQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGATCTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMSNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDSDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccggcgactgctctctgcctccttctcctcgtgctcggtggctcagagaccaag cgcactgcagagtccaggagtgatgataacagtgtcttcgatctctttgaactcattggc ttcatgcggaagggagctgggcgccgggcccccggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccctgactca aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggccact cttcggcaagccaagaaaagcagaggcacactgctctctgtggaacagaaagatggctct ggtcatgtcttcagtctagtgtcaaatggcaaggcaggctccctggacctgagcctttct ggtgatggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacactgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggagaatgctgaactggacatccccatccagaacatcttcactagggacctggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtctttggaacaactctggaaactatcctgcggaacaaaggctgctcc agctccactagtgcaatcattactttggacaaccccatcaatggttccagcccagctatc cgcactaattacattggccataaaacaaaggacatccaagcagtctgtggattttcctgt gatgaactaacaaatatgtttgtggaaatgcaagggctgcggtccatggttacaacactt caagacagagttcgcaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc actcctggggcatgcattcataatggaatcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccaccgtgcctgatggcgagtgctgccctcggtgctgg cctagcgactatgcagatgatggatggtctccttggtctgagtggacctcatgttctgtg acctgtggtaacgggattcagcagagagggcgttcctgtgacagtctcaataaccgctgt gaaggctcctctgtacagactcggacttgccaccttcaagagtgtgataagagatttaaa caggatggtggctggagtcactggtcaccatggtcatcatgttctgtcacttgtggcacg ggcatcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaacct tgtgagggtgaagcaagagaaaacaaagcctgtcagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag aaacgtagccgtctctgcaataaccccgagcctcagtatggtgggaagacttgcgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccgattgatgggtgtctgtct aatccctgctttgcaggggctacgtgtaccagcgcccctgatggttcctggaagtgtggt gcctgtcctgctggctaccatggtgatggtattcactgccaagatattgatgagtgcaaa gaggttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgtccaccacgtttcactggaacacagccctttggccgcagt gttgaggatgccatgagtaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgcaacaagaatgccaaatgcaattatcttggccacttcagtgaccccatg tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagacact gacttagatggatggccaaatgagaacctggtttgtgttgccaatgccacttatcactgc aaaaaagataactgccctaatctgcctaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacaatgatgatgatgatgacggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactacgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa ggagatgcatgtgcaatagatattgatggagatggggtgcttaatgaaagggacaactgc caatatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacacaaccctgaccaggaagacagtgattctgatcgcataggt gaccagtgtgacaacaaccaggacatagatgaagatggccatcagaataaccttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgataaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgat tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaagatttcagatgattcccctggatcccaagggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgac cctggccttgcagtcggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggatattcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacataggctggaaagacttcactgcatacagatggcgacttagc catagaccaaagactggctacatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggaccaatctatgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagatccataa

DBGET integrated database retrieval system