Aphelocoma coerulescens (scrub jay): 138111815
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Entry
138111815 CDS
T10543
Symbol
SYNE3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
acoe
Aphelocoma coerulescens (scrub jay)
Pathway
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138111815 (SYNE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138111815 (SYNE3)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
138111815 (SYNE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
Spectrin_SYNE1
TM-like_Thioredoxin-like_C
Motif
Other DBs
NCBI-GeneID:
138111815
NCBI-ProteinID:
XP_068874286
LinkDB
All DBs
Position
5:complement(53246218..53311686)
Genome browser
AA seq
993 aa
AA seq
DB search
MCEPVGSQGNVTYCNQSRRVFLFHKKQTCFASSNAMTQQLQDEFDSSVENAEAWMKAIQE
RLRINDNTKGPRSALEARLRETEKIRALEPEGSLKMELVLVKADAALRSISEDKKHEVLS
KLKDIKALWEETAIYITHCHSRIEWVWLHWSEYLKAQDEFYTWIHNMRVTLEPDIELQLG
LKEKQWQLSHAQVLQNDVLNQSVLLERLLDEAASLFSRIGDPSVDEDAQKKMSVEYEGIR
QEAQNRVKLLETITKEHEQYSANVNQFQSWLNGVTERLNCCIGEATKSSAEDKLKALKEI
SKDIRSGGKKWKHLENQCAEVIQNTSPLGAARLKDELEELRKSLEKLKLLSSEEEERLLK
IQQSESAYESQARQLEADIQKLRKDLQRLENDLDPGEGEKTEDEFVTLWRKCNATKAALA
AEESKIERLKAQLKELLRFSQDVQPHAESVVSAIHQYQSVRGKTSKMSTDTETQLKRIFQ
NPLQSFEQWKPSVQMLLETPEPELAHIEAALAESSQFKEMLMMLQLKKDLLNNVLGEEKA
ESFLQEAAEASKERELLHKSLLQSKSKLQNLILQHKNFDAGFAPLQKKLSAIKAKLDLEK
EPRPDLLGKKTQLQRLQMIQDDLAELAIHMEEVEKLVQSNTTHRHEMNQLSSDSQALKRS
LEMMIQQSEDHVQKHWAYNDKLSDLQQWISVTREKIDSYQDADGEQNTEGRLEDLERWLA
EFPDKEIQLHLVEAHGQLVMENSSPEETAHVQAELDQLKESWKSLKEMATGLLKKWQLNR
PVADKKKKRAFVDSRWMSRPAFRLFDVEPNHKQEKMGEGQSTSSHLKLLHDFEEWLQGEN
AKLTKVLAGTPSSTEEIKAHQSKLEELQSHVPDGQHLFEDLLHLHPVIGNSEELEDLRYR
WMLYKSKLRESMSTLSAGSLEEPDRFRKKRSGGVCSYLHRVCRAALPLQLLLLLLLLLAF
LLPLAEETHSCTLANNFARSFKLMLRYEGPPPT
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagccagttggatctcaaggaaatgtaacttattgcaatcagtcccggcgagtc
tttttgttccacaagaaacaaacatgttttgcttcttccaatgcgatgactcagcagcta
caggatgaatttgacagtagcgtggagaatgcagaagcttggatgaaggccatccaagag
agactgaggatcaatgacaacaccaaaggacctcgatctgccctagaagccagactgaga
gagactgagaaaatacgtgcactggaaccagaaggcagcttgaaaatggagttggttctt
gtgaaggcagatgctgctcttcgcagcatcagtgaggataagaagcatgaggtgctctct
aaactaaaggacattaaagccttgtgggaagagacagccatatacattactcattgtcac
agccgcattgagtgggtctggttgcactggagtgagtacctgaaagcccaagatgagttt
tacacatggattcacaatatgagagtgaccttggagcctgacattgagttgcagcttggc
ttaaaggagaagcagtggcagctgagccatgctcaggttttgcagaatgatgtcctaaat
cagtcagtcctgctggaaaggctgctggatgaagctgcttcattgttcagcaggataggt
gaccccagtgttgatgaggatgctcagaagaaaatgagtgtggaatatgaaggaatcaga
caagaagctcagaacagagtgaaactgcttgaaacgataaccaaggaacatgagcagtac
agcgctaatgtcaaccagtttcaatcatggctgaatggtgtcacagagagattaaactgc
tgcattggagaagcaaccaagtcttcagcagaggacaagctaaaggcactgaaggaaatt
tccaaagacattaggagtggtggaaagaaatggaagcaccttgaaaatcagtgcgcagag
gtgattcagaatacctctccacttggagctgcaagattgaaggatgagcttgaagagcta
agaaaatccttggagaagttgaaactgctgagcagtgaggaggaggagagattgctcaag
atccaacagtctgaaagtgcctatgagtcccaagccagacaattagaagcagacatccag
aagctgaggaaagatctacagagactagaaaatgacctggatcctggggaaggggaaaag
actgaagatgagtttgtaactctgtggagaaaatgcaatgcaaccaaagcagctctggct
gcagaagagtcaaagattgagaggctgaaggcccagcttaaggaactgctacggttttcc
caagatgtccagccgcacgctgagagtgttgtctctgcaatacaccagtatcaaagtgtg
agaggcaagacttctaaaatgagcactgatacagaaacccaactgaagagaatcttccaa
aatcccctgcaaagttttgaacagtggaagccatcagtccagatgctcctggagactccg
gagccagaactggctcacattgaggctgctctagctgaaagctcccagttcaaagagatg
ttgatgatgttacagctgaagaaagatttgctaaacaatgtccttggtgaggaaaaagca
gagtctttccttcaagaagcagctgaagcttcaaaggagagagaactcctacacaaaagt
ctgctgcaaagcaagagcaaactccagaatttgatattgcaacataagaactttgatgct
ggttttgcaccattgcagaagaaattatctgccatcaaagccaaattagatctagagaag
gagccacggcctgacctcttgggtaaaaagacacaactccagagactccagatgatccaa
gatgacttggcagagcttgcaattcacatggaggaggtagagaagcttgttcagtcaaat
accacacacaggcatgaaatgaaccaactttcatctgactctcaggccctgaagagatca
ctggagatgatgatacagcagagtgaagaccacgttcagaagcattgggcatataacgac
aaactgtctgacctccagcagtggatctcagtaaccagggagaagattgactcctaccag
gatgctgatggagagcagaacactgagggcaggctagaagacctggagagatggctagct
gagtttccagataaggagatccaactgcaccttgtggaagctcatggccagctggtcatg
gagaattcttctccagaagagactgcccatgtccaggcagagctggatcagctgaaggag
tcgtggaaatcactgaaagagatggcaactggcctcctcaaaaagtggcagttaaacaga
ccagtggctgataagaagaagaaaagagcatttgtggacagcagatggatgtctagacct
gctttccgcctttttgatgtagagcccaaccataagcaggagaagatgggagaagggcaa
agtacaagcagccacttgaagctcctacatgactttgaagaatggctacaaggagaaaat
gccaaactaaccaaagttcttgctgggactccatcttccacagaggaaattaaggcacac
cagagcaaacttgaggagctgcagtctcatgtgcctgatggtcagcatctctttgaggac
ctccttcatcttcatcctgtcattggtaactctgaagagctggaggacctgcgctaccga
tggatgctctacaaatctaaactcagagagtccatgagtactctgagtgctggatctttg
gaggaaccagacagattcagaaagaagcgctctgggggcgtgtgctcgtacctgcatcgc
gtgtgccgggcagcactgccactgcaactgctcctcttgctcctgctgctcctggccttc
ctcctgcccctggcagaagagacccacagctgcacactggccaacaacttcgctcgctcc
ttcaagctgatgctgagatacgagggcccacctccaacataa
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