Aphelocoma coerulescens (scrub jay): 138114071
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Entry
138114071 CDS
T10543
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04514
Cell adhesion molecules
acoe04520
Adherens junction
acoe04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138114071 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
138114071 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
138114071 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138114071 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138114071 (PTPRF)
Enzymes [BR:
acoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
138114071 (PTPRF)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
138114071 (PTPRF)
Cell adhesion molecules [BR:
acoe04515
]
Immunoglobulin superfamily
Type II RPTP family
138114071 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
138114071
NCBI-ProteinID:
XP_068879253
LinkDB
All DBs
Position
8:22228384..22608772
Genome browser
AA seq
1901 aa
AA seq
DB search
MVPNFCIPVLTVPAAIFCCLMLPFVRADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTLYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFQVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVRWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHFTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPTSQERITK
YELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTVRVSWVPPPAQSRNGVITQYSIAYQAVEGDDITKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPQSIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYLVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQD
LVNMTKDTSITLTNLKPDTTYNIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLALPKVQTTVPVRWYYIVVVPADQST
RTLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGM
RDHPPIPVTDLSDNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIA
YDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATI
VMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFALYKNGSSEKTEL
RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRTGCFIVIDAMLE
RMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQK
LTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPI
RGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGR
EKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQ
GVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVD
MFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcttctgctgcttg
atgctgccttttgtaagagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgcgttcatcgagatgaa
gctatctatgagtgcacagccaccaatagtgttggggagataaacacgagtgccaagtta
acagtgttagaagaagaccacctcccagccggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgctgccagtggtaaccct
gatcccgaaatctcctggttcaaggacttcctgcccgtcgacactgcaaccagcaatggg
cgaatcaagcaactccgctcgggagctctgcaaatagagaacagtgaggaatcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggaaccctctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccgagcaaccatgag
gtgatgcctggggggagcgtgaacctcacatgcgtggcagtaggtgctccaatgccctat
gtgaagtggatggctggtgtggaggaactgaccaaagaagatgagatgcccgtcggtagg
aatgttctggaactgaataacatcatgcagtctgccaactacacctgcgtggccatctct
tcccttggcatgattgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
acagagccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcgggc
aactctgaccccatttcatattacgtcatccagtacaagcccaaatccttggagggccag
ttccaggaggtggatggtgtggcaacaacccgctatagcataggtgggctcagccccttc
tccgagtatgagttccaggtcatcgcagtcaataacattggcaggggtccccccagcgaa
ctggtcgaggcccggacaggagaacaagctccttcaagtcctcccctcaaagtccaggca
cggatgctgagcgccagcaccatgctggtccggtgggagcagccggaggagcccaacgga
cagatccgagggtaccgcgtgtactacaccaccgacccacacctgcctctgagcatgtgg
cagaagcacaacactgacgacagccacttcaccaccgtgggcagcctcatcacaggcacc
acctacagcatccgcgtcctggccttcacttcggtgggcgacgggcccccctcggacatc
atccaggtcaaaacacagcaaggggttcctgcccagccagctgacttccaggcagaagca
gagtctgatacccgcatcctgttgacctggctgcccacctctcaggaacgcattactaaa
tatgagctgctgtactgggaaggggaggatggcactcagcaaaaggtggagtttgaccca
acctcctcatatgccgtggaaggtctcaaaccggacacattgtataagttccgtctgggt
gcccgctcagagctgggggtaggagtttacacccccacagtcgaagccagaactgcccaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccgtc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacatcaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaaatggaccgagtacaaggtgtgg
gtaagggctcacaccgatgtggggccaggaccacagagcatccccgtgcacgtgcgcact
gacgaggatgtgcccagtgccccaccacgaaaggtggaggtggagtctgtgaattcgact
gccatccgggtgagctggaagctgcccatctccaacaagcagcatgggcagatccgcggg
tatctggttacttatgtgaagctggaaaacaacgagccccgagggcagccagtgatcaag
gacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacagtc
attggaggcctgctgccagaaaccacctactccgtcacagttgctgcctacaccaccaaa
ggagatggtgcccgcagcaagcccaaagtcatcaccaccacaggggcagtcccggggaag
cccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccaccc
aaggagatggtaggggagctgctgggttaccggctgcagtacagacgtctggatgaggaa
aaaatgaacacgatagacttcgggaagagagaccatcactacacggtgaccaacctgcac
aagggggccacgtacctcttcaaattgtctgccaagaacagagctggcccaggagaggag
tttgagaaggagatcacaacggccgaagatgtgccaagcggcttcccacagaacctgcgt
gtggtgggtctcaccacttccaccacagaagttgcttgggaccccccagtcttggcagaa
aggaacggcaagatcgtcaactacacagtggtatacagggacataaatagccagcaggac
ctggttaacatgaccaaggacacgagtatcactttgacaaatttgaaacctgataccact
tacaacatcaaagtgagggcccgcaccagtaaaggggctgggccactcagccccagcatc
cagtcccggaccatgcctgtagagcaagtgtttgctaagaacttccgtgtcaatgccgtc
atgaaaacgtctgtgttgctgagctgggaagtgcctgactcctataaatctgcagtgcct
tttaagattctgtacaatagccagagtgtggaggtggacggccactcgatgaagaaactc
ataagtgacctccagccagacacagactattcttttgtgctaatgaaccgtgggagcagt
gcaggggggctccagcacctcgtctcaatccgcactgctcctgatgtcttgcaaagcaaa
cccatcgccacaaacaaatacatacaggaaggaaaattcacgctcgctcttcccaaagtg
cagaccactgtgccagttcggtggtactacatcgtggttgtgccagcagaccagagcacc
agaaccctgactgctcggtggcggacacctgatgagatggagctggaccagctgctggag
gccataagccaagggagccagagcaggcggcagcgacgccaggcagacagactcaagccc
tacattgctgctcaagtggatgtgctgcctgagaccttcaccctgggggacgagaagaac
tacaaaggtttctacaacaagcctctgtctcaagacctgagctatcgctgcttcgtgctg
gcctcactggaggatggggacacgaagagatatgcagccagcccctactcggatgagatc
gtgatggaagtggcttcagcaaagcagcaggatgaaccagagatgctgtgggtgatggga
cctgtcctggctgtgatattaatcatcatcattgtcattgccatacttctcttcaaaagg
aaaagggcacattccccctcttccaaggatgagcactccattggcctgaaggactcactc
ttggcccactcgtctgacccagttgagatgaggcggctcaactaccagactccaggcatg
cgtgaccacccccccatccctgtgaccgacctctccgacaacatcgaccggctcaaggcc
aacgatgggctgaagttctcccaggagtacgagtccattgatcccgggcagcagttcacc
tgggagaactccaacctggaagtgaataaaccgaaaaaccgctatgcaaacgtgatagcc
tatgaccactcccgtgtcatcctgacttccatcgatggggtcccaggcagtgattacatc
aatgccaattacattgatgggtaccggaagcagaacgcctacatcgccacgcagggaccg
ctgccagaaaccctcagcgacttctggaggatggtgtgggaacagagaacagcaaccata
gtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactggccgagc
cgcggtacggaaacctatgggatgatccaggtgaccctgctggatacagtcgagctggcg
acctacaccgtccgcacctttgcgctatacaagaatggctccagtgagaagacagagctt
cgacagttccagttcatggcttggcccgatcacggggtcccagaataccccaccccaatc
ctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggttgtg
cattgcagtgccggcgtgggccgaactggctgcttcattgtcatcgatgccatgctggag
cggatgaagcacgagaagactgtggacatctatggccacgtgacgtgcatgcgctctcag
cgcaactacatggtgcagacagaggaccagtacatcttcatccacgaggccttgctggag
gctgccacgtgtggcaatactgaggtgcccgcacgcaacctcttcgcccacatccagaag
ctgacccaggtgccaccaggggagagtgttactgcaatggagctggaattcaagctgctg
gccaactctaaagcacatacctcacgtttcatcagtgccaacctcccgtgcaacaaattc
aagaatcgcctcgtgaacattatgccgtatgagctgacgagagtctgcctgcagcccatc
cggggtgtcgagggctctgactacatcaatgccagcttcatagatggctacaggcagcag
aaggcctacatcgccacgcagggaccactggccgagaccacagaggatttctggcggatg
ctctgggagcacaactccaccattgtggtgatgttgacaaagctgcgtgagatgggccgg
gagaagtgccatcaatactggcctgcagagcgctctgcccggtaccagtactttgtggtg
gaccccatggcagagtacaacatgccacagtacatcctccgggagttcaaggtgacagat
gccagggacggccagtcacggaccatccgccagttccagttcacggactggcctgagcag
ggagtgccaaagacaggagagggtttcattgacttcattgggcaggtgcacaagaccaag
gagcagtttgggcaggatgggcccatcacggtgcactgcagtgctggggttgggcgcaca
ggcgtgttcatcacactcagcatcgtgctggagaggatgcgctacgagggcgtggtggac
atgttccagatggtgaagaccttgcggacgcagcggccggccatggtgcagacagaggac
cagtaccagctgtgctacagagccgcactggagtaccttggcagctttgaccactatgca
acgtaa
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integrated database retrieval system
