Aphelocoma coerulescens (scrub jay): 138119493
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Entry
138119493 CDS
T10543
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03250
Viral life cycle - HIV-1
acoe03260
Virion - Human immunodeficiency virus
acoe04060
Cytokine-cytokine receptor interaction
acoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138119493 (CD4)
03260 Virion - Human immunodeficiency virus
138119493 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138119493 (CD4)
04514 Cell adhesion molecules
138119493 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acoe04090
]
138119493 (CD4)
CD molecules [BR:
acoe04090
]
Proteins
138119493 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Tcell_CD4_C
ig
Ig_3
Ig_2
C2-set
V-set_CD47
I-set
CD4-extracel
Sema4F_C
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
138119493
NCBI-ProteinID:
XP_068887530
LinkDB
All DBs
Position
1:complement(93773820..93785540)
Genome browser
AA seq
486 aa
AA seq
DB search
MELCSTAVSCMAATFLLLHLGLISSMAQQNEVQTGLVGGEVTLKCTGIPLDSKLSQDAVV
SWMYYDTLLWRMEKNKAWRKSTFLTGRADIKMENKQLKVWDLKLSDAGIYTCKYGSHEVR
ISLHIFKLTVSLDGHFLQNEVPELILMQNSSSPLPNLNITLFNSNNNRVTPELQSKTRQK
YIVNLKKLEAMDSGTWVCQVHSDSPLINQNISFVVKVLGFQNPDLERKYATVDSTVTLSW
HLNSQMIKWKEGFAGQLNWKQQEGANAHELLDFEVTAQGDLHETKKSSNFLIEIPERKAE
IIIEVKLPKVYFNHSGQYQCQLEYQGRHVQSKIELVVMKVSANPDGPLSRGANMTLTCQV
SGPLPPNAYLRWERVNGTNMDVKNSRQHEVKLEVNISAAGLWSCHLIEDNDRKISLHYHV
EEAPVWISYVIIGASVAGSLLVFALGCLCIISGISWQRRMQRRKRMAQARQYLLENKTCQ
CQHRLN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgcagcacagccgtgagctgcatggctgccaccttcttgcttctgcatctg
ggtctgatctccagtatggctcagcaaaatgaagtccagactgggcttgtaggaggggag
gtgaccctgaaatgcacaggcatacctcttgactcaaaattatctcaggatgcagttgtg
agctggatgtactatgatactcttctatggcggatggaaaagaataaggcctggagaaaa
tcaactttccttactggtcgagctgacatcaagatggaaaataaacagctgaaggtgtgg
gatttgaagctctctgacgctggcatctacacctgtaaatacggctctcacgaagtccgc
atctcactgcatatctttaaattgacagtctctttggatgggcactttctgcaaaatgaa
gtccctgaactgattttaatgcaaaattcatccagccctctacccaatctcaacatcaca
ttgtttaacagtaacaacaacagagtaacaccagaattacaaagcaagacccgtcaaaaa
tacatagtgaatttaaagaaactggaagctatggacagtgggacctgggtgtgtcaggtc
cattcagactctccattgattaatcagaacatctcctttgttgtgaaggtactaggtttt
cagaatccagatttggaaagaaagtacgcaactgttgatagcactgtcaccttgtcatgg
catctgaactcccagatgataaaatggaaagaaggtttcgcaggacagctgaactggaaa
caacaggaaggtgcaaatgctcatgagctgcttgatttcgaagtcacagcacaaggagat
ctgcatgagactaaaaaaagcagcaactttctgattgagatacctgaaagaaaagctgaa
atcatcatagaagtgaagctccccaaagtatatttcaaccattctggacagtaccagtgc
cagctggagtaccaaggaaggcatgtgcagagcaagatagagctggtggtgatgaaagtc
tcagctaaccctgatgggccactctccagaggggccaatatgaccctgacctgccaggtc
tctggtccactcccacccaatgcctacttgcgctgggaacgtgtgaatgggactaacatg
gatgttaagaactcaaggcagcatgaagtaaagttggaggtgaacataagtgctgcaggg
ctgtggagctgtcacctcatagaagacaatgacagaaagatcagccttcattaccacgtg
gaggaagctcctgtttggattagctatgtgataattggagcaagtgttgcaggcagttta
ttggtgtttgcccttgggtgcctatgcatcatcagtggtataagctggcagaggagaatg
caacggagaaaaaggatggcacaagcaagacaatacttgctggaaaacaagacgtgtcag
tgtcaacaccggctgaactaa
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