KEGG   Aphelocoma coerulescens (scrub jay): 138119493
Entry
138119493         CDS       T10543                                 
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03250  Viral life cycle - HIV-1
acoe03260  Virion - Human immunodeficiency virus
acoe04060  Cytokine-cytokine receptor interaction
acoe04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    138119493 (CD4)
   03260 Virion - Human immunodeficiency virus
    138119493 (CD4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    138119493 (CD4)
   04514 Cell adhesion molecules
    138119493 (CD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:acoe04090]
    138119493 (CD4)
CD molecules [BR:acoe04090]
 Proteins
  138119493 (CD4)
SSDB
Motif
Pfam: V-set Tcell_CD4_C ig Ig_3 Ig_2 C2-set V-set_CD47 I-set CD4-extracel Sema4F_C TM_ErbB1
Other DBs
NCBI-GeneID: 138119493
NCBI-ProteinID: XP_068887530
LinkDB
Position
1:complement(93773820..93785540)
AA seq 486 aa
MELCSTAVSCMAATFLLLHLGLISSMAQQNEVQTGLVGGEVTLKCTGIPLDSKLSQDAVV
SWMYYDTLLWRMEKNKAWRKSTFLTGRADIKMENKQLKVWDLKLSDAGIYTCKYGSHEVR
ISLHIFKLTVSLDGHFLQNEVPELILMQNSSSPLPNLNITLFNSNNNRVTPELQSKTRQK
YIVNLKKLEAMDSGTWVCQVHSDSPLINQNISFVVKVLGFQNPDLERKYATVDSTVTLSW
HLNSQMIKWKEGFAGQLNWKQQEGANAHELLDFEVTAQGDLHETKKSSNFLIEIPERKAE
IIIEVKLPKVYFNHSGQYQCQLEYQGRHVQSKIELVVMKVSANPDGPLSRGANMTLTCQV
SGPLPPNAYLRWERVNGTNMDVKNSRQHEVKLEVNISAAGLWSCHLIEDNDRKISLHYHV
EEAPVWISYVIIGASVAGSLLVFALGCLCIISGISWQRRMQRRKRMAQARQYLLENKTCQ
CQHRLN
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggagttgtgcagcacagccgtgagctgcatggctgccaccttcttgcttctgcatctg
ggtctgatctccagtatggctcagcaaaatgaagtccagactgggcttgtaggaggggag
gtgaccctgaaatgcacaggcatacctcttgactcaaaattatctcaggatgcagttgtg
agctggatgtactatgatactcttctatggcggatggaaaagaataaggcctggagaaaa
tcaactttccttactggtcgagctgacatcaagatggaaaataaacagctgaaggtgtgg
gatttgaagctctctgacgctggcatctacacctgtaaatacggctctcacgaagtccgc
atctcactgcatatctttaaattgacagtctctttggatgggcactttctgcaaaatgaa
gtccctgaactgattttaatgcaaaattcatccagccctctacccaatctcaacatcaca
ttgtttaacagtaacaacaacagagtaacaccagaattacaaagcaagacccgtcaaaaa
tacatagtgaatttaaagaaactggaagctatggacagtgggacctgggtgtgtcaggtc
cattcagactctccattgattaatcagaacatctcctttgttgtgaaggtactaggtttt
cagaatccagatttggaaagaaagtacgcaactgttgatagcactgtcaccttgtcatgg
catctgaactcccagatgataaaatggaaagaaggtttcgcaggacagctgaactggaaa
caacaggaaggtgcaaatgctcatgagctgcttgatttcgaagtcacagcacaaggagat
ctgcatgagactaaaaaaagcagcaactttctgattgagatacctgaaagaaaagctgaa
atcatcatagaagtgaagctccccaaagtatatttcaaccattctggacagtaccagtgc
cagctggagtaccaaggaaggcatgtgcagagcaagatagagctggtggtgatgaaagtc
tcagctaaccctgatgggccactctccagaggggccaatatgaccctgacctgccaggtc
tctggtccactcccacccaatgcctacttgcgctgggaacgtgtgaatgggactaacatg
gatgttaagaactcaaggcagcatgaagtaaagttggaggtgaacataagtgctgcaggg
ctgtggagctgtcacctcatagaagacaatgacagaaagatcagccttcattaccacgtg
gaggaagctcctgtttggattagctatgtgataattggagcaagtgttgcaggcagttta
ttggtgtttgcccttgggtgcctatgcatcatcagtggtataagctggcagaggagaatg
caacggagaaaaaggatggcacaagcaagacaatacttgctggaaaacaagacgtgtcag
tgtcaacaccggctgaactaa

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