KEGG   Parazoarcus communis: CEW83_04820
Entry
CEW83_04820       CDS       T05456                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
acom  Parazoarcus communis
Pathway
acom03030  DNA replication
acom03410  Base excision repair
acom03420  Nucleotide excision repair
acom03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CEW83_04820
   03410 Base excision repair
    CEW83_04820
   03420 Nucleotide excision repair
    CEW83_04820
   03430 Mismatch repair
    CEW83_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acom03032]
    CEW83_04820
   03400 DNA repair and recombination proteins [BR:acom03400]
    CEW83_04820
Enzymes [BR:acom01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CEW83_04820
DNA replication proteins [BR:acom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CEW83_04820
DNA repair and recombination proteins [BR:acom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CEW83_04820
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CEW83_04820
   MMR (mismatch excision repair)
    DNA ligase
     CEW83_04820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CEW83_04820
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT BRCT_2 HHH
Other DBs
NCBI-ProteinID: AWI77511
UniProt: A0A2U8GVA9
LinkDB
Position
complement(1042575..1044638)
AA seq 687 aa
MPADSKTIERAAWLRAELARHEHAYYVLDAPTISDAEYDRLFQELEGIEKTFPELASPDS
PTRRVGGKPLAQFPAVRHRIPMLSIRTETDTEESGAHAFDARVRRELGLDESDPDVEYAT
ELKFDGLAMSLRYEDGVLVQAATRGDGENGEDVTSNVRTVRAIPLRLRGDVPPVLEVRGE
VYMRRDDFEALNARQSAAGEKVFVNPRNAAAGSIRQLDPGIAARRPLSFFAYGLGETVGW
NTPATHAGILDALEAFGFPVCKHRDVVAGGAGLAGFHTRVGALRDSLAFDIDGVVYKVNA
LALQRQLGFVTREPRWAVAHKYPAQEAVTRLRGIEVQVGRTGAVTPVARLEPVFVGGVTV
TNATLHNQDEIDRKDIRLGDWVIVRRAGDVIPEIVAPVTERREQDLPRFKLLESLPQRDG
LPCCPVCGSHVVRGEDEAVARCTGGLYCPAQRKQALLHFAGRRAMDIEGLGDKLVEQLVD
AAIIKTPVDIYRLGILALANLERMGEKSAQNLLAAIERSRHTTLGRFIFALGIRNVGEAT
ARDLALHFGNLDAVMAADETCLQQVPDVGPIVAKCIVEFFAEAHNREIIEQLRAAGVEWA
EGEPAPVPSGALAGKVFVLTGSLPTMSRDEAKALIEAKGGKVTGSVSKKTDYLVAGADAG
SKLTKAEALGIDIVDEAGLLSLLASAG
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgccggctgacagcaagacgatcgagcgtgcagcctggctgcgcgccgaactggcccgg
cacgagcacgcctactatgtgctcgacgcgccgaccatttccgatgccgagtacgaccgc
ctgttccaggagctggaaggcatcgaaaagacgtttcctgagcttgcaagcccggactcg
ccgacacggcgggttggtggcaagccactggcccagtttcccgccgtcaggcaccgcatc
ccgatgctgtcgatccgcaccgagacggacaccgaagagagcggggcgcatgccttcgat
gcgagggtgcgccgcgaactcggtctcgacgaaagcgatccggacgttgagtacgcgacc
gagctcaagtttgacggccttgccatgagcctgcgctacgaggacggtgtgctggtgcag
gctgcaacccgcggtgacggcgagaatggcgaggatgtcaccagcaacgtgcgcacggtg
agggcgattccgctgcgtttgcgcggtgatgtgccaccggtgctcgaagtgcgcggcgag
gtctacatgcgccgcgacgacttcgaagcgctcaatgcgcgtcaatccgcagcgggcgaa
aaggtcttcgtcaatccccgcaatgccgcagctggcagcatccgccagctcgatccgggt
attgcagcacgtcgtcccctgtcgtttttcgcctacgggctcggtgaaaccgtggggtgg
aacacgccggccacgcacgccggcattctcgatgcactggaggcgttcggttttccggtg
tgcaagcatcgtgatgtggttgcaggtggcgctggcctggcagggtttcacacccgggtc
ggcgcgttgcgtgacagtcttgccttcgatatcgacggcgtcgtctacaaggtcaatgcg
cttgccctgcagcgccagcttggcttcgtgacgcgtgagccgcgctgggctgttgcacac
aagtacccggcgcaggaagccgtgacgcgtttgcgcggtatcgaggtgcaggtggggcgc
acaggggcggtgacgcccgtcgcccggctcgaacccgtgttcgtcggcggggtgacggtg
accaatgccaccctgcacaatcaggacgagatcgatcgtaaggatattcgcctcggcgac
tgggtcatagtgcgccgtgcgggcgatgtcatccccgagatcgttgcaccggtgaccgag
cgtcgtgagcaggatctgccgcgcttcaagctgcttgagagtctgccccagcgtgacggc
ctgccgtgctgtccggtgtgcgggtcgcatgtggtcaggggagaggacgaggccgttgca
cggtgtactggcgggctctactgcccggcacagcgcaagcaggcgctgctgcattttgcc
ggtcgccgtgcaatggatatcgaggggctgggcgacaagctggtcgaacagcttgtcgat
gccgcgatcatcaagaccccggtcgacatctatcgcctcggcattcttgcgctggccaat
ctcgaacgcatgggcgagaagtctgcgcagaaccttctggcggcgatcgagaggagccgt
cacacgacactgggaagattcatcttcgcgcttggcatccgcaacgtcggcgaggccacg
gcgcgcgatcttgcactgcatttcggcaatctggatgcggtgatggcggctgacgagacg
tgcctgcagcaggtgcccgacgtcggcccgattgttgcgaaatgcatcgtcgaattcttt
gccgaggcgcataaccgcgaaatcatcgagcagttgcgcgctgcaggtgtcgagtgggct
gagggtgagcccgcacctgtcccttctggcgcactggcgggaaaggtctttgtgctgaca
ggcagcttgccgacgatgagccgtgatgaggccaaggcgctgatcgaggccaagggcggc
aaggtgacgggttccgtctcaaagaagaccgattatctggttgcgggcgcggatgcaggc
tcgaagctgacgaaggcggaggcgctgggtatcgacattgtcgatgaggccggcctgctc
tcattgctggccagcgcgggttag

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