Adelges cooleyi (spruce gall adelgid): 126845576
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Entry
126845576 CDS
T09500
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126845576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoo03041
]
126845576
Spliceosome [BR:
acoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126845576
Complex C
U5 SnRNP specific factors
126845576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
EF-G_D2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126845576
NCBI-ProteinID:
XP_050440251
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All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPELESDEEEEEQPPSPEPEPQDIDMIEDGDDGPEEPGMSVVLHEDK
RYYPSAVEVYGPEVETLVQEEDELPLTVPLITPVKQHNFQIKEQHLPNTTYNMEYLADLM
DIAGLVRNVALLGHLHHGKTSLVDCLIRQTHPDLGQLHMDAADADLMRYTDTLLTERQRG
VSIKATPVTLVLPDVNSKSYLMNIFDTPGHVNFSDEVTAALRICDGAVIFVDAAEGVMLN
TERLIKHAIQEKVAITICVNKIDRLMLELKLPPQDAYFKIKHIIDEVNSLLSLHSQNDPS
RVVSPVIGNVCFASSQYAVCFTLKSFAKLYANHYPGVKVDSFAKVLWGDVYFNPKTRKFT
KKSPHNSAQRSFVEFVLEPMYKLFAQVIGDVDTTLPDVLDELGIKLTKREMNINIRPLLR
LVCGRFLNDLSGFVDMCVNHIPSPADNAKNKIDTIYTGPQDTQLARDMLDCNPDGRLMVH
STKMYPTDDCTFFQVMARVMSGTLHAGQEVKVLGENYSLVDEEDSRVMTIGRLWVHEARY
KVEVNRVPAGNWVLIEGIDQPIVKTATITDLITTDDLYIFRPLKFNTQSVIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLVTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVDTSSLKCFAETPNKRNKITMIAEPLEKGLAEDIENQIVDISWDKKRLGEF
FQSKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKNVLRSIRDSIVQGFQWGTREG
PLCEEPIRNVKFKILDAVIAPEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLYVEVQ
APADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIKPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFFDDPM
LLELARQDVSLNYPM
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacctttacgacgaattcggcaactatattggccccgaactggagtccgac
gaagaggaagaagaacaaccgccgtctcccgagcccgaaccgcaggacattgatatgatc
gaagacggtgacgacggacccgaagaacccggtatgagtgtagtgttacacgaagacaaa
cggtactatccgtctgcagtcgaagtttacggtcccgaagtggagacgctagttcaagaa
gaagatgaactgccactgactgttccactgataacgccggttaaacagcataattttcaa
atcaaagaacagcatctgccaaacacaacttataacatggagtacttggccgacttaatg
gacattgccgggttagttcgaaatgttgccctacttggccatcttcaccatggtaaaacg
agtttagtagattgtttgattcgacaaacccatccagatttgggacaacttcacatggat
gcggccgatgccgatttaatgcggtatacagatacattgttgactgaacgtcaaagaggt
gtcagcattaaagcaactcctgtgacgttagtattacctgacgtcaactcaaaatcgtat
ttaatgaatattttcgatacgccaggacatgtaaacttttccgatgaagttacggcagca
cttagaatttgtgacggagctgttatatttgttgacgcagctgaaggtgttatgttgaac
actgaaagattaattaagcacgctattcaagaaaaagtagcgattacaatatgtgtaaac
aaaattgacaggctaatgttagaattgaaacttccgccgcaagatgcttatttcaaaatt
aaacacataatcgatgaagtcaattctttgctaagcttgcattctcaaaacgatccttct
cgggtggtttctccggtaataggaaatgtttgttttgcttcatcgcagtatgctgtttgt
tttacattaaaatcatttgctaaactgtatgccaatcattatccaggcgttaaggttgat
agtttcgctaaagttttgtggggagatgtgtacttcaatcccaaaactaggaaattcacc
aagaagtctccacacaacagcgctcaaagaagttttgtggaattcgtgttggaaccaatg
tacaaattgtttgcccaagtaataggcgacgtagacactactctacccgacgttctggac
gagctcgggattaagctgaccaaacgtgaaatgaatattaatatccgaccgctgttgaga
cttgtttgtggacgattcttgaacgacctcagtggctttgtggacatgtgcgtcaatcat
attccttcgccggccgacaatgccaaaaacaaaatcgacacaatctacacaggaccgcaa
gacacgcagctcgcaagagacatgctcgattgtaacccagacggtcgtctgatggtgcac
agtaccaaaatgtatcccaccgatgactgtacattctttcaagtgatggcgcgagtaatg
agtggtactctgcacgctggccaagaagtgaaagtcttgggagaaaactactcgttagtc
gatgaagaagattctcgagtgatgacaattggaagactgtgggtacacgaggccaggtac
aaagtcgaagtaaaccgagtgccggctggaaattgggtactgattgaaggtatcgatcag
ccgattgttaaaacggcgactattactgatctgataacgactgacgacttgtatatattc
agaccattaaaattcaacacacaatcggttataaaaattgctgtcgagcctgtaaaccca
tcggaattaccaaaaatgttagacggattgcgaaaagtcaacaagtcttatccgttgctt
gtgactcgcgtcgaagaatctggcgaacacgttattctcggtactggtgaactatatttg
gattgtgttatgcacgacctgcgaaaaatgtactcagaaatagacataaaggttgccgat
ccagttgttgctttttgtgaaactgttgtcgatacatcgtcgttgaaatgttttgctgag
actcccaacaaacgtaataaaatcacaatgattgcggaaccgttagagaaaggtctcgct
gaagatattgaaaatcaaattgtcgatatttcatgggacaagaaacgattaggagaattt
ttccaatcgaaatacgattgggatttattagctgctcgttctatttgggcattcggccca
gacactacgggccctaacattctagtcgatgacacattaccttctgaggtcgacaagaat
gtacttaggtccataagagattctattgttcagggtttccaatggggtactcgagaagga
ccgctatgtgaagaacctattcgaaacgttaaatttaaaatattagacgcagtcatcgct
cctgagcctttacacagaggaggtggtcaaataataccaactgctcgtcgcgtcgcttat
tcggcattccttatggcgacacctcgactaatggaaccatacttgtacgtcgaggttcaa
gcgcccgctgattgcgtgtctgctgtgtacaccgtgttggccaaacgtagagggcacgtt
actcaagacgcacctgttcccggatcgccactttacactattaaggcttttattccggca
atcgattcgtttggctttgaaaccgatttacgtacacacactcaaggacaagcattttgt
ttgtccgttttccaccattggcagattgtgcctggcgatccattagacaaaagcattgtt
atcaaaccattggaaccgcaaccggctactcatttagctcgtgaatttatggtgaaaact
cgcagacgaaaaggtcttagcgaggacgtttcaatcaataagttctttgacgaccctatg
ttgttagaactggccaggcaagacgtatctctcaattatcccatgtaa
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