KEGG   Anaeromyxobacter dehalogenans 2CP-1: A2cp1_0729
Entry
A2cp1_0729        CDS       T00833                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
acp  Anaeromyxobacter dehalogenans 2CP-1
Pathway
acp03030  DNA replication
acp03410  Base excision repair
acp03420  Nucleotide excision repair
acp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A2cp1_0729
   03410 Base excision repair
    A2cp1_0729
   03420 Nucleotide excision repair
    A2cp1_0729
   03430 Mismatch repair
    A2cp1_0729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acp03032]
    A2cp1_0729
   03400 DNA repair and recombination proteins [BR:acp03400]
    A2cp1_0729
Enzymes [BR:acp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A2cp1_0729
DNA replication proteins [BR:acp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A2cp1_0729
DNA repair and recombination proteins [BR:acp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A2cp1_0729
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A2cp1_0729
   MMR (mismatch excision repair)
    DNA ligase
     A2cp1_0729
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A2cp1_0729
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT HHH FeoA 5_3_exonuc BRCT_2
Other DBs
NCBI-ProteinID: ACL64084
UniProt: B8JD56
LinkDB
Position
819961..822024
AA seq 687 aa
MKKADASARARELRDRIRAADHAYYVLDQPLLADAEYDRLMHELQALEAEHPELVTADSP
TQRVSGAPSERFERVVHREPMLSLGNVQSDDELHEFDARVRRLLGLPDGEPVGYVVEPKL
DGLAVELVYRDGAFTSGSTRGDGVNGEDVTANLRVVGGLGANRGVPHALEGRPPPRVEVR
GEVLLFKEHFEAMNRQLVRAGEEPFANPRNAAAGTLRQLDWRVTARRPLSFIAYEALLPG
GDPWRTHWEKLEELAAWGFETNAENRRCRGLAEVLAYRDRMAERRFELPYDTDGIVVKVD
DLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGVLTPVVDFDPVRLSGAM
VARATLHNEDEMRRKDILEGDWVLVRRAGEVIPEVVKPLPERRTGAEQPFRFPAECPVCG
ARVVREEGEKVYRCTGAACPAQLVGRLCHFAQRRALDIEGLGEKLAAGLVERGQVKDFAD
LYAVPFEVWQQLFSRPRKEQDAGAARELPEKSAQNMVAALERSRKTTLRRFLFALGIPQV
GEATAATLARHFGDLARVMDADEEALKGVRDVGPETAAEIRAWTQEPQNRRVVERLLAAG
VTPEAEVVEARGPFAGKTVVLTGGLSTMSRDDAKAEIERRGGKVSGSVSRKTYLVVAGED
AGSKLEKARSLGVRIAGEEEFVRLLKE
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgaagaaggccgacgcttcggcgcgtgcccgcgagctgcgcgaccggatccgcgcggcg
gaccacgcctactacgtcctcgaccagccgctcctcgccgacgccgagtacgaccggctc
atgcacgagctgcaggcgctcgaggccgagcacccggagctcgtcaccgcggactcgccc
acgcagcgggtctccggcgctccctcggagcgcttcgagcgggtggtgcaccgcgagccc
atgctctcgctcggcaacgtgcagagcgacgacgagctccacgagttcgacgcgcgggtg
cgccgcctgctcgggctgcccgacggagagccggtcggctacgtggtcgagccgaagctc
gacgggctcgcggtggagctggtgtaccgcgacggtgcgttcacgagcggttccacgcga
ggcgacggcgtgaacggcgaggacgtcaccgccaacctgcgcgtggtgggcgggctgggc
gcgaaccgcggcgtgccgcacgcgctcgaggggaggccgccgccgcgggtcgaggtccgc
ggcgaggtgctgctgttcaaggagcacttcgaggcgatgaaccggcagctggtccgcgcc
ggcgaggagccgttcgcgaacccgcgcaacgccgccgccgggacgctgcgccagctcgac
tggcgcgtcaccgcccgccgcccgctctccttcatcgcctacgaggcgctgctgccgggc
ggcgatccgtggcgcacgcactgggagaagctggaggagctcgccgcctggggcttcgag
acgaacgcggagaaccgccgctgccgcggcctcgccgaggtgctcgcctaccgcgatcgc
atggccgagcgccgcttcgagctcccctacgacaccgacggcatcgtggtgaaggtggac
gacctcgactggcggcggcggctcggcgcggcctcgaagttcccgcggtgggccgtcgcc
ttcaagtacccgccgcaggaggaggcgacgaggatccgcaggatctgggcctcggtgggc
cgcaccggcgtgctcacgccggtggtggacttcgaccccgtccgcctctccggcgcgatg
gtcgcgcgcgccacgctgcacaacgaggacgagatgcgccgcaaggacatcctcgagggc
gactgggtgctggtgcggcgcgccggcgaggtgatcccggaggtggtgaagccgctcccc
gagcgccggaccggcgcggagcagccgttccggttcccggccgagtgcccggtgtgcggc
gcgcgcgtggtccgcgaggagggcgagaaggtctaccgctgcacgggcgccgcctgcccg
gcgcagctcgtcggtcggctctgccacttcgcgcagcgccgtgcgctcgacatcgagggg
ctgggcgagaagctcgccgccggcctggtggagcgcgggcaggtgaaggacttcgccgac
ctgtacgcggtgccgttcgaggtgtggcagcagctgttcagccgcccgcgcaaggagcag
gacgcgggggcggcgcgcgagctgccggagaagagcgcgcagaacatggtcgcggcgctg
gagcggtcgcgcaagacgacgctcaggcgcttcctgttcgcgctcgggatcccgcaggtg
ggcgaggcgaccgcggccacgctggcgcgccacttcggcgacctcgcgcgcgtcatggac
gcggacgaggaggcgctgaagggcgtccgcgacgtgggcccggagaccgccgcggagatc
cgcgcctggacgcaggagccgcagaaccggcgggtggtcgagcggctcctcgccgccggg
gtgacgcccgaggccgaggtggtggaggcgcgcggcccgtttgccggcaagacggtggtg
ctcaccggcgggctctcgacgatgtcgcgcgacgacgccaaggcggagatcgagcggcgc
gggggcaaggtgtcgggcagcgtctcgcgcaagacctacctggtggtggccggggaggac
gccggctccaagctggagaaggcgcgatcgctgggcgttcggatcgccggcgaggaggag
ttcgtgcgcctgctgaaggagtga

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