Actinomyces sp. oral taxon 414: AM609_08755
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Entry
AM609_08755 CDS
T04083
Name
(GenBank) aromatic ring-opening dioxygenase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acq
Actinomyces sp. oral taxon 414
Pathway
acq03030
DNA replication
acq03410
Base excision repair
acq03420
Nucleotide excision repair
acq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AM609_08755
03410 Base excision repair
AM609_08755
03420 Nucleotide excision repair
AM609_08755
03430 Mismatch repair
AM609_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acq03032
]
AM609_08755
03400 DNA repair and recombination proteins [BR:
acq03400
]
AM609_08755
Enzymes [BR:
acq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AM609_08755
DNA replication proteins [BR:
acq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AM609_08755
DNA repair and recombination proteins [BR:
acq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AM609_08755
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM609_08755
MMR (mismatch excision repair)
DNA ligase
AM609_08755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AM609_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
ALC99553
LinkDB
All DBs
Position
complement(2131931..2134396)
Genome browser
AA seq
821 aa
AA seq
DB search
MREDGPVSSNQQPAPDLISVPAAARRRWADLVRVIERARDAYYNAVDAQSPMSDAEYDRL
YRELEELEADHPALSLPSSPTRSVGGRPVTDFAPAPHHERMYSLRDVFSLEEVEEWAARM
AEETGTPDDELPMTAEVKIDGLAIALTYEDGVLTRAATRGDGVTGEDVTGNVRTIASVPL
VLSGDSHPELLEVRGEVYFPVGAFQDFNEARRTANVEREAAGRALLQVFANPRNAAAGSL
RQKNPAVTATRPLAFIAHGIGAIVPAPGEELPERLHEWYGLLEHWGLPVSPYSAVVHGRA
EREAFIARYAERRHDLIHEIDGIVFKLDSILLQAELGHTSRVPRWAAAYKYPPEEVRTRL
LDIDVQVGRTGRVTPFGIMEPVFVSGSTVARATLHNATEVARKGVLIGDTVVLRKAGDVI
PEIVAPVVEARDGSERRFVMPEVCPSCGTRLAPAKEGDVDLRCPNARSCPAQLTERVAHI
GSRGALDVEGLGEEAAAALTQPDAGREDALAAVASGRVLRTERGDLRLDDSQRRALHAAE
LLDAARALAAGAGLAEQAPVLTGEAGLFELGVEDLREVMVYRPVASRGRPTGDWRLARFF
WSKQSYGRDGEVKRAAAPGKNATAMLAQLDAAKGRPLWRVLVALSVRHVGPTAARALATR
FGSLEALRGASEEELSGVDGVGPTIAAAWREWLEVDWHREILDRWAACGVRTADEADGER
VERTLEGLTVVVTGTLERFTRDRAKEAIVSRGGRAAGSVSKRTSFVVVGENAGSKETRAR
ELGLPILDEEGFERLLAGGPDAVAPAEAEDAEQPAPAAQKA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggatgggcccgtgagcagcaaccagcagccggcccccgacctcatctccgtc
cccgccgccgcccgccggcggtgggcggacctggtccgggtcattgagcgcgcccgcgac
gcctactacaacgccgtcgacgcccagtcgcccatgtccgacgccgagtacgaccggctc
taccgcgagctggaggaactcgaggccgaccaccccgccctgtcgctgccctcctcgccc
acgcgcagcgtcggcggcaggcccgtcaccgacttcgcccccgcgccccaccacgagcgc
atgtactccctccgagacgtcttcagcctggaggaggtcgaggagtgggcggcgcgcatg
gccgaggagacgggcacgcccgacgacgagctgcccatgaccgccgaggtcaagatcgac
ggcctggccatcgccctgacctacgaggacggcgtgctcacccgggccgccacccgcggc
gacggcgtcaccggcgaggacgtgaccggcaatgtgaggaccatcgcctccgtgccgctg
gtcctgtccggcgactcccacccggagctgctggaggtgcgcggcgaggtctacttcccc
gtcggggccttccaggacttcaacgaggcccgccgtaccgccaatgtggagcgggaggcg
gcgggccgggcgctgctgcaggtcttcgccaacccccgcaacgccgccgccgggtccctg
cgccagaagaaccccgccgtcaccgccacccgccccctggccttcatcgcccacggcatc
ggggcgatcgtcccggcgccgggggaggagctgccggagcggctccacgagtggtacggc
ctgctggagcactggggcctgcccgtgtccccctacagcgccgtcgtgcacggccgggcc
gagcgggaggccttcatcgcccgctacgccgagcgccgccacgacctcatccacgagatc
gacggcattgtcttcaagctcgactcgatcctcctgcaggccgagctcggccacacctcc
cgcgtgccccggtgggcggccgcctacaagtacccgcccgaggaggtccgcacccgcctg
ctggacatcgacgtccaggtggggcgcaccggccgggtgacgcccttcgggattatggag
ccggtgttcgtgtccggctccacggtggcccgcgccaccctccacaacgccaccgaggtc
gcccgcaagggcgtgctcatcggggacacggtcgtgctgcgcaaggccggcgacgtcatc
cccgagatcgtcgccccagtggtcgaggcccgcgacggctccgagcgccgcttcgtcatg
cccgaggtgtgcccctcgtgcggcacccggctcgcccccgccaaggagggcgacgtcgac
ctgcgctgccccaatgcgcgctcgtgccccgcccagttgaccgagcgggtcgcccacatc
ggctcgcgcggggcgctggacgtcgaggggttgggggaggaggcggccgccgccctgacc
cagcccgacgccgggcgcgaggacgcgctggcggccgtggcctccggccgcgtcctgcgg
accgagcgcggcgacctgcgcctggacgactcccagcgtcgggccctgcacgccgccgag
ctcctcgacgctgcccgggccctggccgccggggccgggctggccgagcaggcaccggtc
ctcaccggcgaggcgggtctgttcgagctgggcgtggaggacctgcgcgaggtgatggtt
taccggccggtggcctcgcgcggccggcccaccggggactggcgcctggcccgcttcttc
tggtccaagcagagttacgggagggacggggaggtcaagcgggcggcggcgccgggcaag
aacgccaccgccatgctcgcccagctggacgccgccaaggggcggccgctgtggcgggtg
ctggtggccctgtcggtgcggcacgtcggcccgacggcggcgcgcgcgctggcgacgcgc
ttcggctccctggaggccctgcgcggggcgagcgaggaggagctgtccggcgtcgacggc
gtcggccccacgatcgccgcggcgtggcgggagtggctcgaggtcgactggcaccgcgag
atcctcgaccgctgggccgcctgcggcgtgcgcacggccgacgaggccgacggcgagcgg
gtcgagcggaccctggagggcctgacggtggtggtgacggggacgctggagcgcttcacc
cgcgacagggccaaggaggcgatcgtctcccggggtgggcgggccgccgggagcgtgtcg
aagaggaccagcttcgtcgtcgtcggcgagaacgcgggctcgaaggagaccagggcccgc
gagctgggcctgcccatcctcgacgaggagggcttcgagcgcctgctggcgggcgggccc
gacgccgtcgcacccgccgaggccgaagacgccgagcagcctgctcccgccgcccagaag
gcgtag
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