Acidiphilium cryptum: Acry_0757
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Entry
Acry_0757 CDS
T00527
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03030
DNA replication
acr03410
Base excision repair
acr03420
Nucleotide excision repair
acr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Acry_0757
03410 Base excision repair
Acry_0757
03420 Nucleotide excision repair
Acry_0757
03430 Mismatch repair
Acry_0757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acr03032
]
Acry_0757
03400 DNA repair and recombination proteins [BR:
acr03400
]
Acry_0757
Enzymes [BR:
acr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Acry_0757
DNA replication proteins [BR:
acr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Acry_0757
DNA repair and recombination proteins [BR:
acr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Acry_0757
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acry_0757
MMR (mismatch excision repair)
DNA ligase
Acry_0757
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Acry_0757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
GT4-conflict
DZR_2
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ABQ29977
UniProt:
A5FWJ5
LinkDB
All DBs
Position
848631..850679
Genome browser
AA seq
682 aa
AA seq
DB search
MTSPASGVPEPADPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHP
DLAAALDQVGAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVA
EPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGE
VYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGET
HWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQER
LGFAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLH
NEDEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPA
GEVVRRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRD
REAAIAALEGWGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAV
WRRQMEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLVPMLTIEDEVA
AAGGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKAAKA
ASLGVTVLSEAEFRSLAGLPPG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagtcccgcgagcggcgtgccggaaccggcggacccgaaggcgcggctggccgaa
ctggtcgagcggctcgccgccgccgatgccgcctattatcgcgacgatgcgccgatcatg
gacgatgcggcctatgacgcgctgcgccgcgaagccgagtccctgcgggccgcgcatccc
gatctcgccgccgcactcgaccaggtcggcgcggccccgtcgggcgcgttcggcaaggtg
cgccaccgccttcccatgctctcgctcgacaatgtgttcgagccggcggatttcgtcgag
ttctgcgccagcatccgccgctttctcggcctcggcgcggcaccgctcgccttcgtcgcc
gaaccgaagatcgacggcctgtcgatctcgctgacctacgagaaccgccgtttcgtgcgc
ggcgcgacgcgcggcgacggcaccgagggcgaggacgtcaccgaaaatctccgcacgctg
cgcgaactccccgcaaccctgccggacgacgcgccggatttcatcgagatccgcggcgag
gtctacatgaccaagacggatttcatcaccctcaaccaggggcaggcccgccagttcgcc
aatccgcgcaacgcggcggccggcagcctgcgccagctcgatcccgcggtgaccgcatcc
cgccggctttcgctcttcgcctatgcgcggggcgccgcgagccaggcggtgggcgagacc
cattgggactatctcgcgatcctgcgccgctggggcttcccggtgaacccgctggcggag
cgggtgagcgaggcgggcgcggaacccttccagcgctcgatcggcgagcgccgggccggg
ctcgattacgatatcgacggcgtcgtctataaaatcgacgatctggcgctgcaggagcgc
ctcggcttcgccggccgcgcgccgcgctgggcggtggcctggaaattccccgccgagcgg
gcgctgaccaccctgctcgggatcgacatccaggttggccgcaccggcgcgctcaccccg
cgcgcccggctcgatccggtgaatgtcggcggcgtgctggtcagccacgcgacgctgcac
aacgaggacgagatcgcccgcaaggatgtgcggatcggcgacaccgtggagctccagcgc
gccggcgacgtgatcccgcagatcctccgcgccctgcccgagcgccgcccggccgactcg
gtgcccttcgtcttccccgatcactgccctgtctgcggcgcgctggcgattcgcccggcc
ggcgaggtggtgcgccgctgcactggcgggctgagctgcccggcccaggtggtcgagcgc
ctgatccatttctgctcgcgcctcgccttcgacatcgagggcatgggcgaaaagacggtc
caggagttccacggcctcggctggctcgaaagcccggcggacatttttaccctccgcgac
cgcgaggccgcgatcgcggcgctggagggctggggcgaggtctcggcgcgcaagctgatc
gccgcgatcgacgcccgccggcggatttccctcgcgcgcttcatctacgcgctcggcata
aggcggatcggcgagcagaacgcgaagctgctggcgcggcactattcgtcctatgccgtg
tggcggcggcagatggaggaggcgggcgtgatcggttccgacgcgcggctggaactcggc
tcgatttccgggatcggcccatcgatcgccgaggaactcgccggtttcttcgccgaaccg
cataaccgcgacctgctcgaccgcctggtgccgatgctgaccatcgaggacgaggtcgcg
gcggcgggcggggcgctcgccggcaagacgatcgttttcaccggcaccctcgagtcgctc
acccgcccggaggccaaggcgcgggcggaggcactgggggccagggtgaccgagtccgtc
tcgaagaagaccgacttcgtggtggtgggcgcggacgccggctccaaggccgcgaaagca
gccagcctcggcgtgaccgtcctcagcgaggcggaattccgatctctcgcggggcttccg
cccggttga
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