Anolis carolinensis (green anole): 100557128
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Entry
100557128 CDS
T01608
Symbol
kdm2b
Name
(RefSeq) lysine demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100557128 (kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acs03000
]
100557128 (kdm2b)
04121 Ubiquitin system [BR:
acs04121
]
100557128 (kdm2b)
03036 Chromosome and associated proteins [BR:
acs03036
]
100557128 (kdm2b)
Enzymes [BR:
acs01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100557128 (kdm2b)
Transcription factors [BR:
acs03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100557128 (kdm2b)
Ubiquitin system [BR:
acs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100557128 (kdm2b)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100557128 (kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100557128 (kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
F-box-like
JHD
F-box
zf-CXXC
Cupin_8
JmjC
LRR_At5g56370
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
100557128
NCBI-ProteinID:
XP_016853168
Ensembl:
ENSACAG00000001871
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1284 aa
AA seq
DB search
METGQDSGRRLRSISRRLYDENEDLSDVEEIVSVRGFSLEEKLRSPGFRGQFVRAMEGKD
FTFEYVQREALRAPLVFRSKAGLGIKMPDPDFTVRDVKLLVGSRRIVDVMDVNTQKGTEM
SMSQFVRYYETPEAERKKLYNVISLEFSHTKLANIVKRPNVVDLVDWVDNMWPPHLKEKQ
TDATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTSQNL
ELYEEWVLSGKQSDIFLGDRVELCQRIELKQGHTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQAKFRYPFYYEMCWYVLERYVFCVAQRSHLSKEYQKESMFI
DTTRKHSLDSFSSDSCADMDDELCDIHIQEKDESPEKTPKASADGASSPNSTHSEGREIP
GKKPKPTAGGRCLKRTLSNASDESVKSTPADYPKTPTGSPAAEVSAKWTHLTEFELKGLK
ALVEKLESLPENKKCIPEGIEDPQALLEDMKVGRGVTFHTKNLIKTEFLKLCGAWGSAVA
ELWGRPAHPPARLPCAMAMSVSPDEEDYDSEQEQEQNRSVGRPKGKLGPSSAVKLAANRT
TAGARRRRTRCRKCEACLRTECGECNFCQGHERSLGGPGRMKQSCSKPAPVLPHTAVCLV
CGEAGKEDTAEEEGGKFNLMLMECSICNEIIHPGCLKVRESDGVVNEELPNCWECPKCNH
AGKTGKQKRGPGFKYASNLPGSLLKEQKINRENKEVVPDLGKRKGECEEPPRKKVDDRSP
KPSLVDPLLRRKSEEAHLRRKRKFEKPPEPALRKQRRSWKSPDDRSGMVKPSRRFKQEPE
DDLPEEPPKSRDSDQSRSSSPMAGPSSEGAESRDKKKFKIRRKTRLPNKELSKELSKELN
QEIQKTENSLAQENHQPIKSEPESENEEPKRLLGLERPHRFNKSLNGTPRELRHQLSLSL
RSSSTGTPRALPRPPPSLSPPKCMQMERHVIRPPPISPPPDSLPLDDGAAHVMQREVWMA
VFRYLSHSELCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLS
WTNTSKKQLSWLINRLPGLRDLLLAGCSWIAVSALCSSSCPLLRTLDAQWVEGLKDAQMR
DLLSPPTDNRPGQIDNRSKLRNITELRLSGLDITDASLRLIIRHMPLLSRLNLSYCNHMT
DQSINLLTAVGTPTRDSLTEVILQDCNKVTDQCLSYFKRCGSICQIDLRYCKQVTKEGCE
QFIAEMSVSVQFSQVEEKLLQKLS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggagacagggcaagattcgggaagaagactgcgatccatcagccggcggctctacgac
gagaacgaggacctctccgacgtggaggagatcgtcagcgtccggggcttcagcctggag
gagaagctgaggagccctggcttccggggacagtttgtgcgggccatggagggcaaagat
ttcacttttgagtatgtgcagcgagaggcccttcgcgcccccctcgtcttcagaagtaag
gctggactgggaattaagatgccagacccggatttcacggtacgggacgtcaagctcctt
gtggggagccgtcggattgtggacgtgatggacgtcaacacgcaaaaaggcaccgagatg
agcatgtctcagtttgtgcgctactacgagacccccgaggccgagcgcaagaagctctat
aacgtcatcagcctggagttcagtcacaccaagttggccaacattgtcaagcgtcccaat
gtggtggacttagtcgactgggtggacaacatgtggcctcctcatctgaaggagaaacag
acggatgccaccaatgctattgcagagatgaagtatcccaaagtcaaaaagtactgtttg
atgagcgtcaaaggatgcttcactgactttcacattgatttcggaggcacatcagtttgg
tatcacgttttccgaggcggaaaaatcttctggttgattcctccaacttcacagaaccta
gaactctatgaggaatgggttctctcagggaagcagagtgatatctttctgggcgacagg
gtggagctatgccaaagaattgaactgaagcaaggacacactttcttcatcccttcgggg
tggatccatgctgtttacacgccggttgattccctggtgtttgggggcaacatcctgcat
agctttaatgttcccatgcagcttcgcatctacgagattgaggacagaacgagggtgcag
gccaagttccgctacccgttctactatgagatgtgttggtatgtcctagagaggtacgtc
ttttgcgttgcccagcgctcccacctcagcaaagagtaccagaaagaatccatgttcatt
gatacaacaaggaaacacagcttagatagcttctcctcagattcctgtgcagacatggat
gacgaattgtgtgatattcacatccaggagaaggatgagagcccagagaaaacccccaag
gcctctgcggatggagcgtcttctcccaacagcacacattcagaagggagagagattcct
gggaagaagccaaagcccacggctggtggccggtgcctcaaaaggactttgtctaatgct
tcggatgaaagcgtaaagtccacgccggccgactatcccaaaacgcccaccggctcccca
gcagctgaggtttcggccaaatggactcacttgacagagtttgaactgaagggcttgaaa
gccctcgtcgaaaaactcgaatcccttccagagaataagaaatgcattcccgaaggcatc
gaggatcctcaggctcttttggaagatatgaaggtagggagaggggtcacattccacacg
aagaaccttattaagactgagtttttaaaattgtgcggggcgtggggctccgccgtcgcc
gagctgtgggggaggccggcccacccgcccgcccgcttgccatgcgccatggctatgtcc
gtcagccccgacgaggaggactacgactcggagcaggagcaagagcagaaccggtccgtt
gggcgacccaaaggcaaactggggcccagctctgctgtcaaactcgccgcaaaccggacc
acggctggcgcccgccgaagaaggacacgatgccgcaagtgcgaggcctgcctgcgcacc
gagtgcggcgagtgcaacttctgccagggacatgaaagaagtttggggggcccgggccgc
atgaagcagtcctgctctaaaccggcaccagtactgccccatacggctgtgtgcctggtg
tgtggggaagcagggaaggaagacacggcggaggaggaggggggcaagtttaatctcatg
cttatggaatgttccatctgcaacgaaatcatacacccaggatgccttaaggtgcgcgaa
tcggacggcgtggtgaacgaggagctgcccaactgctgggaatgtccaaagtgcaaccat
gccggcaaaaccgggaaacaaaagcgcgggcccgggttcaagtatgcctccaacctccct
ggctccctgctcaaagaacagaagatcaaccgggagaacaaggaggtggtcccggatctg
ggcaagcggaaaggcgagtgcgaggagccgccccggaagaaagtggacgaccgctccccc
aagccctctctggtggacccgctgctgcggaggaagtcggaagaagctcacttgcggcgg
aagaggaaatttgaaaagcctccggaaccggctctgaggaagcagaggcgatcctggaag
tcccccgatgaccggagtggcatggtcaagccctcgcggcgtttcaagcaggagcccgag
gatgacctccccgaggagcctccgaaaagcagagacagcgaccagtcccgctccagctcc
ccgatggccggccccagttcggagggggccgaatcccgcgacaagaagaaattcaagatc
cgccggaagactcgcctccccaacaaggagctcagcaaggagctcagcaaggaactcaac
caggagatccaaaagacggagaacagcctggcccaggagaaccaccagcccatcaagtcg
gagcccgagagcgagaacgaggagcccaagcgcctgctgggtctggagcggccccaccgc
ttcaacaagagcctcaacggcacgccgcgggagctccggcaccagctctcgctcagcctg
cgcagcagcagcacgggcaccccccgggccctgccccggcctcccccgtccctctcgccc
cccaagtgcatgcagatggagcgccacgtcatccgcccgccccccatcagccccccgccg
gactctctcccgctggacgacggggcggcccacgtcatgcagagggaagtctggatggcc
gtcttccgctacctcagccacagcgagctctgcgtctgcatgagagtgtgccggacctgg
aatcggtggtgctgtgataaaagattgtggaccagaatagacctaaaccattgcaagtcc
atcactccgctcatgctcagtggcatcatccggcggcagccagtcagcctcgatttgagc
tggacaaacacatccaagaagcagctcagctggctcatcaacagactcccaggcctccgg
gatttgctgttggccggctgctcctggattgccgtgtccgctctctgcagctccagttgc
ccactcctccgaacgctggatgcccagtgggtggagggccttaaagatgcccagatgcga
gaccttttgtccccaccaactgacaacaggcccggtcaaatcgacaaccggagcaagctg
cgcaatatcacggaattgcgcctgtcggggctggatatcacggatgcgtccttgcgcctg
atcatccgccacatgcctctcctgtcccggctcaacctcagctactgcaaccacatgacg
gaccagtccatcaacctgctcacagcggtcgggacccctacgcgggactccttgaccgag
gtcatcttgcaagactgcaacaaggtaacggaccagtgtctctcctacttcaagcgctgc
gggagcatttgccagatcgacctgcggtactgtaagcaggtgaccaaggagggctgcgag
cagttcattgcggagatgtctgtgagcgtccagttcagccaagtggaagagaaactgctc
cagaagctgagttag
DBGET
integrated database retrieval system
