Anolis carolinensis (green anole): 100560069
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Entry
100560069 CDS
T01608
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100560069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100560069
Spliceosome [BR:
acs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100560069
Complex C
U5 SnRNP specific factors
100560069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
100560069
NCBI-ProteinID:
XP_003222658
UniProt:
A0A803SS94
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All DBs
Position
6:complement(64302530..64332696)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRDSKDLDELDDDDDDDDMGDHDDDHHGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFASSQYSICFTLGSFAKIYTDMYGDINYQEFAKRLWGDIYFNLKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKAGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctatatgatgagttcggaaattatattggtccggagcttgattctgat
gacgacgacgatgaaatgggtcgagattcaaaggatcttgatgagctcgatgatgatgac
gatgatgatgatatgggggaccatgatgatgaccatcatggaatggatgtggtgcttcat
gaagataagaagtactacccaactgctgaagaagtctatggtccagaggtggagaccata
gtacaagaagaagacacacagcccctcactgagcctattattaaaccagtgaagaccaag
aaattctctcttatggagcaaacgttgccagtcacagtgtatgagatggacttcctagca
gatctgatggataattctgaattgatccggaatgttacactctgtgggcacctacaccat
ggaaagacttgttttgtggattgcctgattgaacagactcatcctgaaataagaaaacgt
tacgatcaagatctttgctatacagacatactgttcactgagcaggagaggggagttggg
atcaagagcacaccagtgactattgttctcccagacaccaagggcaaatcatttctcttc
aatatcatggacacacccggtcatgtaaacttctcggatgaggtcacagcaggacttcgc
atttccgatggtgtggttctcttcattgatgctgctgagggggtaatgctcaacactgag
cggttgatcaagcatgcagtgcaagagagattggcagtaactgtgtgcattaacaagatt
gaccgactaatactggaactgaaactgcctccaactgatgcctattacaaactgcgacac
attgttgatgaagtcaatggcttaatcagcatgtattccacagatgagaacctgatcctt
tctccacttctgggaaatgtttgttttgccagctcccagtacagcatctgtttcacactg
ggttcctttgctaagatctacactgacatgtatggagacatcaactatcaggagtttgct
aaaaggctttggggagacatctactttaatctcaaaacgagaaagttcactaaaaaggct
ccaacaagcagttcccagcggagctttgtggaattcattcttgagcccctctacaaaata
ttggctcaggtggttggggatgttgacaccaccctgccccgaacactggatgaactggga
atccatctaaccaaagaggaactgaagctcaacatccgccctctcctgaggcttgtctgc
aagaaattttttggagagttcacaggctttgtggatatgtgtgtgcagcacatcccctcc
ccgaaggcaggagcaaagaccaagattgagcatacttatactggtggagttgactctgac
ctgggagaggccatgagcgaatgcgaccctgatggtccacttatgtgccataccacaaag
atgtacagtacagatgatggggtccaatttcatgctttcggaagggtgttaagtgggact
atccatgcagggcagcctgtcaaggttcttggagaaaattacacactagaagatgaggaa
gactcacaaatttgtacagttggacgactgtggatctcggtagcaaggtaccacatagaa
gtcaacagggtgcctgccggcaattgggtgctcattgagggagtggaccagcctattgtg
aagacagccaccatcactgagccaaggggcaatgaagaggctcagatattccgtcctttg
aagttcaataccacatctgtcatcaaaattgcagtagagcctgtaaatccctctgagcta
cccaagatgctggatgggctgcggaaggtcaacaagagttatccttctctcactacaaag
gtggaagaatctggagaacatgtcatcttgggaacaggcgagctctatcttgactgtgtg
atgcacgacttgcggaaaatgtactcagaaattgatatcaaggttgctgatcctgttgtc
actttctgtgagacagttgtggaaacatcttccctgaagtgttttgctgagacacccaat
aagaagaacaagatcactatgattgctgagcctctggagaaaggtctggctgaagacatt
gagaatgaagtggtgcagataacatggaacaggaaaaagttgggtgaatttttccagacc
aaatatgattgggatttgctggctgctcgttctatctgggcctttggaccagatgctaca
ggaccaaacatcttggtggatgacaccttgccatcagaggttgacaaaactcttctgggt
tctgtgaaggacagtattgtgcagggtttccagtggggaactagagaaggaccactttgt
gatgagttgatccgtaatgtgaagttcaagattctggatgctgttattgcccaggaacca
ttgcaccggggaggtgggcagatcatcccaacagcccgccgggtggtgtattctgctttc
ctcatggccaccccacgattaatggagccatattactttgtggaagtccaggcccctgct
gattgtgtgtctgcagtgtacacagttttagccaggcgaagaggccatgtgacccaggat
gcacccatcccaggttctcctctgtacactatcaaagccttcatcccagctattgactca
tttgggtttgagactgacctcaggacacacacccaaggacaagcattctcactctcagtc
ttccaccactggcagattgttccaggtgacccattagacaaaagcattgtgattagacct
cttgaaccccagcccgcacctcatctggccagagagttcatgatcaagactagacgcagg
aaggggctaagcgaggacgtgagcatcagcaagttcttcgatgaccctatgttgctggag
ctggccaaacaggatgtggtgttgaactaccccatgtga
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