Anolis carolinensis (green anole): 100561211 Help Entry 100561211         CDS       T01608                                  Symbol traf6 Name (RefSeq) TNF receptor associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism acs  Anolis carolinensis (green anole) Pathway acs04010   MAPK signaling pathway acs04120   Ubiquitin mediated proteolysis acs04140   Autophagy - animal acs04144   Endocytosis acs04620   Toll-like receptor signaling pathway acs04621   NOD-like receptor signaling pathway acs04622   RIG-I-like receptor signaling pathway acs05132   Salmonella infection acs05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:acs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100561211 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100561211 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100561211 (traf6)    04140 Autophagy - animal     100561211 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100561211 (traf6)    04621 NOD-like receptor signaling pathway     100561211 (traf6)    04622 RIG-I-like receptor signaling pathway     100561211 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     100561211 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100561211 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:acs04131]     100561211 (traf6)    04121 Ubiquitin system [BR:acs04121]     100561211 (traf6) Enzymes [BR:acs01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100561211 (traf6) Membrane trafficking [BR:acs04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100561211 (traf6) Ubiquitin system [BR:acs04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100561211 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 TRAF6_Z2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX PspA_IM30 TRAF3_RING Med21 RING_XB3-XBAT31 zf-RING_11 U-box Sina_ZnF DUF4455 zf-C2HC_3 TMF_DNA_bd DUF16 CENP-F_leu_zip DUF7310 HMMR_N Spc29 Kbp-5 TMF_TATA_bd TolA_bind_tri DUF4200 CAGE1 Motif Other DBs NCBI-GeneID:  100561211 NCBI-ProteinID:  XP_003214697 Ensembl:  ENSACAG00000005108 UniProt:  A0A803T038 LinkDB All DBs Position 1:53549810..53581149 Genome browser AA seq 548 aa AA seqDB search MSLLHSNTSFETNSQESGCCAAMASACSAAAKEESINASVSNETGGTLSNSFMEETQGYD VEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPIDNEILLETQL FPDNFAKREILSLTVKCPNKGCDQKMELRHLEDHQQHCGFASEKCPQCQGIFQKNRLQEH IKLECPRRQVSCPNCALLMPYEDKEVHDGVCLLANVCCEYCNTVLIREQLPNHYDNDCPT APVPCTYSDFGCPEKMQRNELARHWQEFTQVHMRMMAQTLRNVHVTNPASGNFHGGLSFD PSLFSQAMPPSCECSPEVRNFKETIQQLEGRLVRQDHQIRELIAKMETQNSQVGDLKGTI KNLEEKITELEAQQCNGIFIWKIEHFSVYLKALEEERPVVIHSPGFYTGKPGYKLCMRLH IQLPNVQRCANYISLFVHIMQGEYDNYLPWPFQGTIRLSVLDQSEGSPRQNHEEVMDTKP ELLAFQRPKTRRNPKGFGYVTFMQLQTLRQRTYIKEDTVLVRCEVLTRLDVMSPRREGFQ PRSTDGTV NT seq 1647 nt NT seq  +upstreamnt  +downstreamnt atgagtttgctacatagcaacaccagctttgaaaccaatagtcaagagagtggctgctgt gcagccatggccagtgcttgcagtgctgcagccaaggaagagagcatcaatgccagtgtc agcaatgagactggtgggacactttcaaactctttcatggaggaaacacaaggctatgat gtggagtttgatccaccgctggaaagtaaatacgaatgccccatctgtttaatggctctg cgagaagcagtacagacaccatgtggacaccgtttctgcaaagcatgcattgtaaaatct ataagagatgccggtcataaatgtccaatagacaatgaaatcttactagaaactcaactg tttcctgacaactttgcaaaacgagaaatcctctcactgacagtgaaatgtcctaataag ggctgtgaccagaagatggaattaaggcatttagaggatcatcagcaacactgtggtttt gcttccgaaaagtgtccccagtgccagggcatttttcagaagaatcggctacaagaacac atcaagctagaatgtccacggcggcaagtctcctgtccaaactgtgcattgcttatgcct tatgaagataaagaggttcatgatggagtatgccttttggcgaatgtctgctgtgagtac tgtaacacagtgctaatcagagaacagttacctaatcactatgataatgattgtcctact gctccagtaccatgtacctatagtgattttggatgtccagaaaaaatgcagagaaatgag ttggcacgccattggcaagagttcactcaggttcatatgagaatgatggctcagactctc cggaatgttcatgttacaaacccagcttctggaaatttccatggtggtttatcctttgac ccatccctcttctctcaagccatgccaccatcatgtgaatgtagcccagaagtccggaac ttcaaggagaccattcagcaactggaaggtcgtttggtgagacaggatcaccaaatcaga gaactcattgccaagatggagacccagaactcccaggtgggggatctcaaaggtacaatt aaaaatctagaggagaaaatcactgaattggaagcacagcagtgtaatggtattttcata tggaaaattgagcatttcagtgtttatctgaaagccctagaagaagaaagacctgttgtg atccacagcccaggtttctatacagggaagcctggctacaaactttgcatgcgtctgcat atccagcttccaaatgttcagaggtgtgcaaactatatttccctttttgttcatattatg caaggggagtatgacaattatctgccctggccgtttcaaggcaccatacgcctttctgtt ctggatcagtcagaaggatctccaagacaaaaccatgaagaagtaatggataccaagcct gaactgctagctttccagcgcccaaaaacccgtcgcaacccaaaaggctttggatatgtg acttttatgcagttgcaaactctaagacaaagaacatatataaaagaggatactgtcctg gtacgttgtgaggttttaacacgtttggacgtaatgagtccccgaagagaaggttttcag cctcgcagcacagatgggactgtgtag

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