Anolis carolinensis (green anole): 100561936
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Entry
100561936 CDS
T01608
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100561936 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acs03400
]
100561936 (lig4)
Enzymes [BR:
acs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100561936 (lig4)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100561936 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
100561936
NCBI-ProteinID:
XP_003215362
Ensembl:
ENSACAG00000014566
UniProt:
G1KPZ8
LinkDB
All DBs
Position
1:complement(137057311..137064384)
Genome browser
AA seq
911 aa
AA seq
DB search
MSSVPASHAPSKLTVASQVPFGDLCSTLERMQKGKSRQEKTKYFKEFLDSWRKFHDALHK
NEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRCPKQGQLTIQQVNDLLDSVSTNNAAKRKDLVKKCLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDATELHNVTTDLEKVCRQLHHPSVFL
SDVSITLFSAFKPMLAAIANIQQIEKQMNNQSFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFENNVQNCILDGEMMAYNPITQTFMQKGNKFDIKRMV
DDSELQTCFCVFDVLMINDQKLGHEILSKRYEVLNKIFTPIPGRIQVVSKTQANTRKEVV
DALNEAIDNREEGIVVKDPMSAYKPDKRGEGWLKIKPEYVNGLMDELDLLVVGGYWGKGL
RGGMMSHFLCAVAETPPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKYWKPYRKRDPP
CSILCGTEKPEVYIEPCNSVIVQIKAAEIVNSDMYKTECTLRFPRIEKIREDKEWHECMT
LDLLEQLRGKASGKLATKHLDISDNEPQEKKRKTVPKVKKKLDLMDHFKAPDLSSVSKVS
SMFQEVEFCVMSGTESYTKYELESKIAEFGGSIVQNPGPDTYCVVAGTENVRVKNIISSN
KHDVVRAEWLVQCFQTKQFVPWQPAFIIHMSPETKQHFAREYDCYGDSYTADVGVAQLKE
VFSRMNDLEEKVSWEVIADIEARYLWDNSGLCLFRQCTVYLDPSAEVSNSGAKITQTRLL
TRALTLRFHGAKVVPQLEEGVSHVISKDGADLTRIKTIRRTFERKFKIVSEQWVKDSIKA
GKLQNDNSYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtccctgcttcacatgctccttccaagctaacggtggcatcacaagttcct
tttggagatctttgttcaactttagaacggatgcaaaaaggcaaatctcgacaagagaaa
acaaaatatttcaaagaatttttagactcctggaggaaatttcatgatgctcttcataaa
aatgagaaggatgtaacagattccttttatcctgcaatgagacttattcttccccagttg
gaaagagagaggatggcttatggaattaaagaaacaatgcttgctaagctatatattgaa
cttctaaatttacccaaagatggaaaagatgctttaaaacttctgaattaccgaacacct
actggttcacgaggagatgctggagactttgctatgattgcctattttgtgctgaagcca
agatgtcccaagcaaggtcagctgaccatacaacaggtgaatgatcttttagattctgtg
tctaccaataatgctgctaaaagaaaagatctggtgaaaaagtgtcttctgcagttaata
actcagagctcagcacttgaacagaaatggttgatcagaatgatcataaaggatttgaaa
cttggggttagccagcaaactatattttctatattccatcctgatgctaccgaattgcac
aatgttaccactgatttggaaaaggtttgtaggcagttgcaccacccttctgtcttcctt
agtgatgtttctattacattattttctgcctttaagccaatgcttgctgctattgctaac
atacagcagattgaaaaacaaatgaacaaccagagtttctacatagaaaccaaattagat
ggtgaacggatgcagatgcacaaagatggagatgtttacaaatatttttcccgaaatgga
tttgattacactcagcaatttggtgcgtctccgcttgaaggctcattgactccgttcatc
cataatgtttttgaaaacaatgttcagaactgcattttagatggtgaaatgatggcctac
aatcccattacgcagaccttcatgcaaaagggaaacaaatttgatatcaaaaggatggtt
gatgattctgaactacagacatgcttctgtgtctttgatgttctaatgatcaatgatcaa
aagttgggccatgagatactgagcaaaagatatgaagtattaaataagatctttacacca
ataccaggtagaatacaggtggtttctaaaacccaagcaaacactcggaaagaagtagta
gatgctctaaatgaggcaatagataacagggaagaaggcattgtggtgaaagaccccatg
tcagcttacaagccagataaacgtggagaaggatggctgaagatcaaaccagagtatgtt
aacggattgatggatgaacttgacctcttagttgttgggggttactggggaaaaggtctt
cgtggtggtatgatgtcccattttttatgtgctgttgccgaaactccgccacctggtgaa
aaaccatctgtattccattccatttgtcgtgttggttcaggttacactatgaaagagctg
tatgatcttggcttaaaattagctaaatattggaagccatatcgtaaaagggatcctccc
tgtagtatcctatgtggaacagagaaacctgaagtctatattgaaccttgtaattcagtc
attgttcagattaaagcagctgagattgtcaatagtgatatgtacaaaacagagtgtact
ttacgtttccctcgcattgagaaaataagagaagataaagaatggcatgaatgtatgaca
cttgaccttctcgaacaactcagaggcaaagcttctgggaagctagcaactaagcacctt
gatataagtgataatgagccacaagaaaagaaacgcaaaactgtgccaaaggttaaaaag
aaacttgacttaatggaccacttcaaagcccctgatctttccagtgtaagcaaagtttcc
agtatgtttcaagaggttgagttctgtgttatgagcgggacagaaagctatacaaaatat
gaactagaaagcaaaatagcagaatttggtggcagcatagtacaaaatccggggccggac
acttactgcgttgttgcaggaactgagaatgttagagtgaaaaatattatttcttccaat
aagcatgatgttgtgagagcagaatggcttgtacagtgttttcaaaccaaacagtttgtg
ccttggcagcctgctttcataattcacatgtctccagaaaccaaacaacactttgcccgt
gagtatgattgctatggtgatagttacactgctgatgtcggtgtggcccagttaaaggag
gtcttctcaagaatgaatgacttggaggaaaaggtttcatgggaagtgattgctgacata
gaagcacgttatttatgggacaactctgggctgtgtttgtttaggcagtgcaccgtttac
ctggatccttctgctgaagtgagcaattctggtgccaagatcactcagaccagactgtta
actagggcactgacccttcgctttcatggagcaaaagttgtcccgcagcttgaggagggt
gtctcccatgtcatcagtaaagatggtgctgatttgacaaggataaagacaatcagaaga
acatttgaaagaaaatttaaaatagtgtctgagcagtgggtaaaagattccataaaagct
gggaagctgcaaaatgataatagttacttaatttaa
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