Anolis carolinensis (green anole): 100565669
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Entry
100565669 CDS
T01608
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acs03036
]
100565669
03400 DNA repair and recombination proteins [BR:
acs03400
]
100565669
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100565669
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100565669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Nmad5
F420_ligase
Motif
Other DBs
NCBI-GeneID:
100565669
NCBI-ProteinID:
XP_016854298
Ensembl:
ENSACAG00000008850
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1979 aa
AA seq
DB search
MAAEGSRVLTVFVYDRRRDTSDEGEKVLRCPEGDYGRLYDAVCQVFGISSEETFIITTTN
RKEITIENFGEIVKDKMTCYLLHSIDQLLPSATKERIDFIPHYDTLVKSGIYEYYASEGQ
NPLPFALAELIDNSLSATSQNTGVRRIQLKLLFDDTQGKPAIVVIDNGRGMSSKQLNNWA
VYRLSKFTRHGDMESDHSAYVRPPAVHHSLNSDISYFGVGGKQAVFFIGQSARMISKPAG
SQDVHELVLSKEDFEKKEKNKESVYSSYIRNRKLCDSSHIVNDDERFLHNLITEEEDKKC
FTAVVITGVQPDHVHYLKNNFHLWIRQLAHIYHYYIHGSKGNEINLPKKEGRPFSNIDIE
ISMFEKGKTPKIMNLREIKDDMQTLYISTAADSFEFKANVEGDGIVEGIIRYHPFLYEKE
TYPEDPCFPSRIKDDDEEEEDDEADCFAVERGARGKRPIFECFWNGRLIPYTTVEEFEWC
AAPKKRGPTPIECYKRISGVLFTNDKFQVSTNKLTFMDLEIRLKDKNTIFTRIVNGQAQR
MKIDREFASWLKECHEKYDKQIKFSHFKGLITRPEVSSKRMQRPWATYSAIEWDGKTYKV
EQLVKSIKTVPIYHGSIQNFFLYGDHDGDVYAPGGFVQLALEPQALYDEIMVIPIHKLDR
SASDTALKRYIEEEMARLPDKLSVTWPEGDELLPDETKLAGSTIGALKVEILNKKGEPMQ
KLPGSRHGGSKKLLVELKVILDSPTGNKEIISHISQHGNKWPFWFKKMENINKLGAYTLK
LQVVLNESNADIYAGRSLPSKTFKFNIIEGKPQKFSIGLLDPPFRVGLPFSIPLDVQDEF
GHSTYLREDIVPNLEASGLTLHYEEVERGPNCAIKGITACGLVNSLQGKNFSLKITLPGL
KEESQVLKIKLLPGPPCKLEVQPNSDILKTENGVAFPFHVKVLDKAGNLTAQPKLIVHCK
FSGAPDLPVYTVDCSSTGSNILTGNVLHVQNIKKEQIINAKIEILSCKNVPPLEKTIKIL
PSSRVAKLQIFSVEGEKAIHIKHQDEINWIAGDVMQNLIFQMYDEGEREIKITPTLAEKI
KVNWTPTIDREQLLNGFLPDVKVPTSVNDLRYNEVTFHDEHVSLGSGFTVRPLPDDPKHI
KCRIKGSDKLQMCETLQSQIEVMITDQHGNHIRNLTSSCVTSLGISGNDLDKSSLKIVWQ
EDTQTICVTGIRFKTCPPGIKELCFAWHEFSHFVRLNLVGGPPAKLLLIDWTDLEEPVPV
INGKELHKPLILQVCDQWNNPSSESNVRINLLKASSVKITPSNLLLKTDENGRANFGIVT
IHAPRGEHVMQFKALYNRNTLYCPVIKLNVLPDPEKPICLNVKYDKDAIFIAGSTFPDFM
VSVISEANNIIVNVNPGRICMKMWEGQRSATLSQNVTTFGCSKKKDDKDEGFFYFRDKMV
PEKVGTYSIQFLFAMDKTNALNSEQIIIEVVPNEPTQLMPRNLPNTPAVTNVWAVGSRTL
VKDLTLIIMDEYRNCTGSDLDGKIIAKIKSSIEKDTDIPVFQGKTSTVEFPLHRGIVEIE
DLVLAENCPGRDSTEYILEFEPAIPALKRQLKSYCLSFLFYNGYKKQQQMATLTKRRDKL
SQSINAYKSLFDTTNQLLGELKSQILETEKKEAQLKNSLERHQIDIPQMNALHYVDSLIT
QKKSEQEEIMKQPRRTCTISNYPRSQDVLGKISHLAQIEDNEVAKVISWHLASDMDCVVT
LTTSAARRIFDETQGRQQVLPLDSIYKKSLPDWNRPLPHLRNGRNSFKPMGIPIFARDLL
TFPEHTENCQTVFGMLLGETIIVDNLDAANHYRTEVVKISHCPTLLTREGDRIRSNGKFG
GLQNKAPPMDKLRGMVFGEPLPKRYNILSEQIDLLQQYRTAVLRLYKVKTELEDQEKTMN
TPEMLKKKEQLADQEKTLKSIEQELGMTSPAQGTTSSLPPGENDLTESPSPPKRMRRIV
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaaggcagcagggtcctgacggtcttcgtctacgaccgccgccgagacact
tcggacgagggcgagaaagttcttcgctgtcctgagggagactatgggcgcctttatgac
gccgtctgtcaggtgtttggcatttcttctgaagaaacatttataatcacaactactaac
agaaaagagatcacaatcgaaaactttggtgaaattgttaaggacaagatgacttgctac
ttgctacactccattgatcagttgcttccctcagcaacaaaggagcgtattgatttcatt
ccacattatgatacacttgtgaaaagtggaatatatgaatattatgctagtgaaggacaa
aatcctctgccatttgctcttgcagaattgattgataactcattatcagctacttcccaa
aatacgggtgtacggagaatacagttaaagctgttgtttgacgacacccaaggaaaacca
gctattgttgtgattgataatggaagaggcatgtcttctaaacagcttaataattgggct
gtatatcgattgtcaaagtttacacgacatggcgatatggaaagtgatcattcagcttat
gtacgacctccagctgtacatcacagtttaaacagtgatatatcatattttggggttggt
ggcaaacaagcagtgttttttattggacaatctgctagaatgataagcaaaccagcgggt
tctcaggatgttcatgagcttgttctttctaaagaagatttcgaaaagaaagagaaaaac
aaagaatctgtgtacagcagctacattagaaacagaaagctatgtgactcttctcacatt
gttaatgatgatgaaagatttctgcacaatcttataacagaagaagaagataaaaaatgt
ttcactgcggtagttatcactggtgttcaaccagatcatgtgcactacttaaaaaataat
tttcatctttggataaggcagttggcacacatatatcattactatatccatggttcaaag
ggaaatgaaataaatttgccaaagaaagaaggaagaccttttagtaacatagacattgag
atatcaatgtttgaaaaaggaaagacacccaagattatgaatcttagagaaatcaaagat
gacatgcagaccttgtatataagcactgcagcagatagttttgagttcaaggctaacgtt
gaaggagatggtatagtagaaggcattatacgttatcatcctttcttgtacgaaaaagaa
acctaccctgaagacccttgctttccttcaagaataaaagatgatgatgaagaagaagaa
gatgatgaagcagactgttttgcagtggaaaggggagctagagggaaaagacctattttt
gaatgtttttggaatggaagactaatcccatatacaactgtggaagaatttgagtggtgt
gctgctcccaagaagagaggacctacacccattgaatgttacaagagaatttctggtgta
ttatttacaaatgacaaatttcaagtcagcaccaataaactgactttcatggatttggag
ataaggttaaaagacaaaaatacaatttttacaagaattgttaatggacaggcgcagaga
atgaaaattgacagagaatttgcatcatggctcaaagagtgccacgaaaagtatgacaag
cagataaaattttctcacttcaaaggactaattacacgccctgaagtgtcttccaaaaga
atgcagcgtccctgggctacatattcagcaatcgagtgggatggaaaaacatataaagtt
gaacagctagtaaaatcaattaaaacagttccaatataccatggaagtatacaaaacttt
tttctatatggagatcatgatggagatgtgtatgctccaggaggatttgttcaattagct
ttggaaccccaagcactatatgatgaaataatggttattccaatacacaaacttgatcgt
tcagcatctgacacagcactgaaaagatacattgaagaagaaatggccaggcttcctgat
aagttgtcagtcacatggcctgaaggagatgaattgttaccagatgaaacaaaacttgct
gggtctactataggtgcattaaaggttgaaattttgaataaaaaaggagagcctatgcaa
aaacttccaggctcaaggcatggaggatcaaagaaactgcttgtggaactaaaggttatt
ttggattctcctactggaaataaggaaattatttctcatatcagtcaacatgggaataaa
tggcctttctggttcaaaaaaatggaaaatattaataaacttggggcctacactttgaaa
cttcaagtggtgttgaacgaaagcaatgcagacatttacgcaggacgatctcttccatct
aaaacttttaaatttaatatcatagagggcaagcctcagaagttttcaataggtcttctg
gatcctccatttagagttgggcttccattcagcattcctctagatgtccaggatgaattt
ggtcattcaacttatctgagagaagatattgtgcctaacctagaggccagtggtttaaca
ttacactatgaagaagtagaaagaggaccaaattgtgccattaaaggaataacagcttgc
ggccttgtaaacagtttgcagggcaagaacttctctttgaaaatcactcttccgggtctg
aaggaagaatcccaggtcttgaaaattaaacttcttccaggtcccccttgtaaattagaa
gtccaaccaaattctgacattttgaaaactgagaatggagtagcatttccttttcatgtt
aaagtgctggataaagcaggaaatctaacagcgcaacccaaactaattgttcattgcaag
ttttccggagctcctgatcttcctgtgtatactgtggactgcagcagtaccgggtcaaat
attttaactggtaatgttctacatgtacaaaatataaagaaggagcagatcattaatgca
aagattgaaatacttagttgcaaaaatgtgccaccactggagaagacaattaaaatactt
cctagcagtcgtgttgcaaaacttcaaatatttagtgttgagggagaaaaagctattcat
attaagcaccaggatgaaattaactggattgcaggtgatgtgatgcaaaatcttattttc
caaatgtatgatgagggggaaagagagatcaaaataactccaactttggctgaaaagatt
aaggtaaactggactccaacaattgatagagaacaattacttaatggttttttaccagat
gtgaaagtgccaacatctgtaaacgatctgcgctataacgaggtgacattccatgatgaa
catgtatcactgggaagtggttttacagtcagaccacttcctgatgatccaaaacatata
aaatgcagaatcaaaggatcagataaattacaaatgtgtgaaacattacaaagtcaaata
gaggtgatgattacagatcagcatggaaatcacattcgaaatctgacatcatcttgtgtg
acttcattgggaatttctgggaatgatctggataagtcaagtctgaaaattgtttggcag
gaagatacccaaactatttgtgtcacgggtatcagatttaagacatgtccgcctggaatc
aaagaactgtgctttgcttggcatgaattttctcattttgtgagattaaatttggtggga
ggacctccagctaaattgcttcttattgattggacagacttagaggagcctgtgccagtg
attaatggcaaagaactacacaaacctcttatactccaagtctgtgatcagtggaataac
ccatcttctgaatctaatgtcagaatcaaccttttaaaagcttccagcgtaaagattaca
ccttcaaatctgcttcttaaaacagatgaaaatggtagagcaaattttggaattgttact
attcatgcccctagaggagagcatgtgatgcagtttaaagccttgtataatagaaacaca
ttgtactgcccagtaattaaattaaatgttctgcctgatcctgagaaacctatatgtttg
aatgtcaagtatgacaaggatgctatctttatagctggaagtacctttcctgatttcatg
gttagtgttatttctgaagctaacaacattattgtaaatgtaaatccaggaagaatttgc
atgaaaatgtgggaaggacaaagaagcgcaactttatcacaaaatgttacaacatttggc
tgctccaaaaaaaaagatgacaaggacgaaggctttttctacttcagggataaaatggtt
ccggaaaaagtgggcacatacagcatccagtttttgtttgccatggacaaaacaaatgct
cttaacagtgaacagattataattgaagtggtgcctaatgaaccaacacagctgatgcca
agaaatttgccgaatactcctgccgttactaatgtttgggctgttggcagtcggactctt
gtcaaggacctgaccctcattataatggatgaatacagaaactgcaccggaagtgattta
gatggaaaaatcatagctaaaattaaaagttcaattgagaaagatacagacattcctgtg
ttccagggaaaaacaagtacagttgaatttcctcttcacagaggaattgttgaaattgag
gatcttgtacttgcagaaaattgtccagggagagacagtacggaatatattctggaattt
gagccagcaataccagctttgaaaagacagttgaaatcttactgtctctcttttttgttt
tacaatggttacaaaaagcagcagcagatggcaacacttactaaaagaagggacaaacta
tctcagtcaataaatgcatataaaagtttgtttgacaccactaatcagcttctcggtgaa
ctaaagagtcaaatcctagaaacggaaaaaaaggaggctcagctgaagaacagtctggaa
agacatcagattgatatacctcaaatgaatgctctgcactatgttgattctttaataaca
caaaaaaagtctgagcaggaagaaataatgaagcaacctagaagaacgtgcacaattagc
aattatcccagaagccaagatgtgttgggcaagatttcacacttggcacagattgaagat
aatgaagtggcaaaggtcatctcttggcatctggcaagtgatatggactgtgtcgtcact
ctaactacttctgctgcccgccgtatatttgatgaaacccaaggccggcagcaagtattg
ccgcttgactctatttataaaaaaagtctaccagactggaacaggcctttacctcaccta
cgaaatggaagaaactctttcaagcctatgggaatacccatatttgctagggacttgctg
acatttccagaacacacagagaactgccagacagtgtttgggatgctcttaggagaaacc
atcattgttgacaatctggatgctgcaaatcattatagaacagaggttgtgaaaatttca
cattgcccaactttactgacaagagaaggagacagaattcgcagcaatggcaagtttgga
ggccttcaaaataaagcccctcccatggataaacttcgagggatggtttttggagaacct
cttccaaagcgttacaatattctctctgagcagatagatctccttcagcaataccgtaca
gctgttttgagactttataaagtaaaaacagaacttgaagatcaagaaaaaaccatgaat
actccagaaatgctaaaaaagaaagaacagcttgctgatcaagagaagactctcaagtca
atagagcaggaattaggtatgacttcaccagctcaaggcaccacatcatcgcttccccca
ggagaaaatgatttaactgaaagtccaagtccaccaaaaagaatgcggaggattgtatag
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