KEGG   Anolis carolinensis (green anole): 103278301
Entry
103278301         CDS       T01608                                 
Name
(RefSeq) single-stranded DNA cytosine deaminase
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103278301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acs03019]
    103278301
Messenger RNA biogenesis [BR:acs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103278301
SSDB
Motif
Pfam: APOBEC2 NAD1 NAD2 SNAD4 APOBEC_N APOBEC3 APOBEC4 APOBEC4_like APOBEC_C APOBEC1 dCMP_cyt_deam_1 DUF4142 DUF717
Other DBs
NCBI-GeneID: 103278301
NCBI-ProteinID: XP_008105138
UniProt: G1KV46
LinkDB
Position
3:98127720..98135931
AA seq 269 aa
MPCFLRKQLREKDFEENFNNTVLVRKTLILFSFKKRSSILWKTWGYAYNDPGNQHAECLV
LSNIEQFIAENQIKGKYKMTFFMSHTPCHKCSDKIVSFLASRKGLSMKIKASRPYFLNEG
RKGLYLLKRIGVLLKMMDRTDFEECFYLFVHPLKTFTPWSDLDEQSKKNMDDLAALWKQA
MDDNFIENEKKTEEKTTKELKICIHDSTIESLIISDFAASQLDVDEVLESPCEIPEVERF
QLGPETPQKMTCSDKATEAVQSVKRKLEF
NT seq 810 nt   +upstreamnt  +downstreamnt
atgccctgctttctcagaaaacaactacgtgaaaaagactttgaagaaaactttaacaat
acagtattagtcagaaaaaccttaatcctgtttagttttaaaaagaggagcagtattctt
tggaagacatggggttatgcctacaatgatcctggcaaccaacatgctgaatgtttggtt
ttgagtaatattgaacaattcatcgcagaaaatcagatcaaaggaaaatataaaatgaca
ttctttatgtcacacactccttgccataaatgcagtgataagatagtgtctttcttagct
tcaagaaaagggttgtccatgaaaataaaagcttcaagaccatattttttaaatgaagga
cgaaaaggcctctatcttctgaagaggattggcgtcctactcaaaatgatggacagaact
gattttgaagaatgcttctatttatttgtgcacccattaaagacattcactccatggtca
gatttggatgagcaaagcaagaagaacatggatgatctggcagcactttggaaacaggca
atggatgacaattttattgaaaatgaaaagaagacagaagaaaagaccacaaaggaactt
aaaatatgtatccatgacagcacgattgagtcattaatcatttctgattttgctgcatca
caacttgatgtcgatgaagttttggagagtccatgtgaaataccagaagtggaaagattt
cagctaggtccagagactcctcagaagatgacttgctctgataaagcaacagaagctgtc
cagagtgttaaaaggaaacttgaattctag

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