Aspergillus clavatus: ACLA_015620
Help
Entry
ACLA_015620 CDS
T01148
Name
(RefSeq) U6 small nuclear ribonucleoprotein (Lsm3), putative
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_015620
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_015620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_015620
03041 Spliceosome [BR:
act03041
]
ACLA_015620
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACLA_015620
mRNA degradation factors
5'-3' decay
Lsm complex
ACLA_015620
Spliceosome [BR:
act03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ACLA_015620
Complex C
U2 snRNP components
ACLA_015620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
4706743
NCBI-ProteinID:
XP_001274546
UniProt:
A1CBK2
LinkDB
All DBs
AA seq
74 aa
AA seq
DB search
MADTEDAGASSVSEPLDLVRLSLDEIVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETIY
VVEEDENEEETIRV
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggccgatactgaggatgccggtgcttcgtccgtctcggagcctttggatctggtgcgc
ctctcgctcgacgaaattgtgtttgtgaagcttcgcggcgatcgcgagctcaagggccgc
ctacacgcctatgatagccattgcaacctcgttctgggtgatgtcgaggagaccatctac
gtggtcgaggaggatgagaatgaagaggagaccattcgcgtatga
DBGET
integrated database retrieval system
