KEGG   Aspergillus clavatus: ACLA_047110
Entry
ACLA_047110       CDS       T01148                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmB, putative
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
act  Aspergillus clavatus
Pathway
act03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACLA_047110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_047110
   03041 Spliceosome [BR:act03041]
    ACLA_047110
   03032 DNA replication proteins [BR:act03032]
    ACLA_047110
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     ACLA_047110
Spliceosome [BR:act03041]
 Complex A
  U1 snRNP components
   Sm proteins
    ACLA_047110
  U2 snRNP components
    ACLA_047110
 Complex B
  U1 snRNP components
    ACLA_047110
  U4/U6.U5 tri-snRNP components
    ACLA_047110
 Complex C
  U2 snRNP components
    ACLA_047110
DNA replication proteins [BR:act03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     ACLA_047110
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 4704381
NCBI-ProteinID: XP_001271668
UniProt: A1CH87
LinkDB
AA seq 219 aa
MAANKQGKMQNLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAG
PSNAPLVEAEEKRTLGLTIVRGTHVVSCSVDGPPPADPSARLGTNVPGAAAAAATLAAGP
GISKPAGRGLPVGLGGPAAGVGGPPPPPGGFGGFPPGGFPGAPPPGFAGRAGPPGGPPGF
GPPPGFAPQGGPPGSFQPPPGFQPPGQGRGFPPPGFGGR
NT seq 660 nt   +upstreamnt  +downstreamnt
atggccgccaacaagcagggcaagatgcaaaacctcatcaactatcgcatgaggattacc
ctgaccgatggccgacagatgaccgggcagatgctcgcctttgacaagcacatgaacctc
gtacttgcagacacagaagaattccgtcgcgtcaagcggaagtctaagccggctgccgga
ccgtcaaatgcgcccctggttgaagcggaggagaagcgcactctcggtctcacaatcgtg
cgcggtactcacgttgtttcctgctccgtcgatggtccccctcctgccgatccctccgca
cgacttggaacgaacgtgccaggcgctgcagctgcagctgccactctcgctgctggccca
ggaattagcaagcccgctggacgtggtcttcctgttggtcttggaggtcctgctgctggt
gtcggaggaccaccacctccccctggtggatttggtggcttcccacctggtggtttccct
ggcgcaccacccccgggctttgctggtcgtgccgggcccccaggaggtcctcctggcttc
ggtcccccacctggctttgccccccagggtggccctcctggctctttccaacctcctcca
ggattccagcccccaggccagggtcgcggtttccccccaccaggttttggaggaagatga

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