Actinoplanes sp. L3-i22: L3i22_104350
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Entry
L3i22_104350 CDS
T08939
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3i22_104350 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_104350 (nth)
Enzymes [BR:
actl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L3i22_104350 (nth)
DNA repair and recombination proteins [BR:
actl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L3i22_104350 (nth)
Prokaryotic type
L3i22_104350 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BCY15347
LinkDB
All DBs
Position
complement(11649880..11650662)
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AA seq
260 aa
AA seq
DB search
MKRFAGETPIGVKRRARKMARVLADTHPDAHCELDFSTPLELAVATILSAQTTDVRVNQV
TPRLFRKYQSAADYASADRAEMEEILRPTGFFRAKTNSLINLGQTLLATHDGRLPGKLDE
LVKLPGIGRKTANVILGNAFDVPGITVDTHFRRLTNRFGWVHEEDPVKIEFLVADLIEKR
DWTMLSHRVIFHGRRVCHARKPACGACTLAASCPSYGTGPTEAAPAAKLLKGPRARDLAA
AAGVDPELVPAAAVLAPEEP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttcgcgggcgagacgccgatcggtgtgaagcgccgggccaggaagatggcc
cgggtgctcgccgacacccatccggacgcgcactgcgagctcgacttcagcacgccgctg
gagctggccgtggcgacgatcctgtccgcgcagaccaccgacgtccgggtcaaccaggtg
accccgcggctgttccggaaatatcagtcggcggccgactacgcctccgccgaccgggcc
gagatggaggagatcctccggccgaccgggttcttccgggccaagacgaactcgctgatc
aacctcggtcagacgctgctggccacgcacgacggccggctgcccggcaagctcgacgag
ctggtgaagctgcccggcatcgggcgcaagaccgccaacgtgatcctcggcaacgcgttc
gacgtgcccgggatcaccgtcgacacgcacttccggcggctcaccaaccggttcggctgg
gtccacgaggaggatccggtcaagatcgagttcctggtcgccgacctgatcgagaagcgc
gactggacgatgctgtcgcaccgggtgatcttccacgggcggcgggtctgccacgcgcgg
aagccggcctgcggggcctgcacgctggcggcgtcctgcccgtcgtacgggaccgggccg
accgaggcggcgccggccgccaagctcctcaaggggccccgggcccgggatctggcggcg
gccgccggggtcgacccggagctggtgccggccgcggccgtgctcgcgccggaggaaccg
tga
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