Actinomyces sp. zg-332: HCQ94_00265
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Entry
HCQ94_00265 CDS
T08424
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
actm
Actinomyces sp. zg-332
Pathway
actm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HCQ94_00265 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actm03400
]
HCQ94_00265 (nth)
Enzymes [BR:
actm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HCQ94_00265 (nth)
DNA repair and recombination proteins [BR:
actm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HCQ94_00265 (nth)
Prokaryotic type
HCQ94_00265 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QPK94192
LinkDB
All DBs
Position
complement(69339..70025)
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AA seq
228 aa
AA seq
DB search
MTNYKPTRKSKQAKEKAKLIVEILSKTYPDSKCSLDYTNAYELLVATVLSAQTTDERVNQ
VTPELFKNYPSPKVLSQAQISDVERILKPIGFYRTKAERIIKLGSQLVEKYNGEVPDRLE
ELVTLSGVGRKTANVVLGNAYNIPGLTIDTHIGRISRRLGWTKHKDPVKAESDLAGLLDP
LIWTVTCHRLIDHGRNICTARKAHCEICPLSELCASAFDLKKIEKAKL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattacaagccaaccagaaaatcaaagcaagctaaagaaaaagctaaattgatt
gtagaaatcctgtcaaaaacttatcctgactcaaaatgtagtttggactatacaaatgct
tatgagctactagtagcaactgtcttatcagcacaaacaactgatgagagagtaaaccaa
gtaactcctgaactatttaaaaactatcctagtcctaaagttttaagccaagcacaaatc
agcgatgtggaaagaatacttaaacctatagggttttatcgtacaaaagctgaacgaatt
ataaagctcggatcacagttagttgaaaagtataacggcgaggttcctgataggttggaa
gaactagttactttatcgggggttgggcgtaaaacagctaatgtagtactaggaaatgct
tataatattcctgggttaacaatagatacccacatcggacgaatttctcgtaggctaggt
tggacaaaacataaggatcccgtgaaagctgaatcagatttggctggtttgctagatcca
ctaatttggactgttacttgtcaccgattaatagatcatggtagaaatatttgtactgca
cgcaaagcccactgcgaaatctgtcctttatccgagttgtgtgcttcagcatttgatttg
aaaaagattgaaaaagctaaactataa
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