Actinomyces gaoshouyii: B6G06_06045
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Entry
B6G06_06045 CDS
T04911
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
actp
Actinomyces gaoshouyii
Pathway
actp03030
DNA replication
actp03410
Base excision repair
actp03420
Nucleotide excision repair
actp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B6G06_06045
03410 Base excision repair
B6G06_06045
03420 Nucleotide excision repair
B6G06_06045
03430 Mismatch repair
B6G06_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actp03032
]
B6G06_06045
03400 DNA repair and recombination proteins [BR:
actp03400
]
B6G06_06045
Enzymes [BR:
actp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B6G06_06045
DNA replication proteins [BR:
actp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B6G06_06045
DNA repair and recombination proteins [BR:
actp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B6G06_06045
NER (nucleotide excision repair)
GGR (global genome repair) factors
B6G06_06045
MMR (mismatch excision repair)
DNA ligase
B6G06_06045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B6G06_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
HHH_5
BRCT
HHH
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
ARD41954
LinkDB
All DBs
Position
complement(1476125..1478701)
Genome browser
AA seq
858 aa
AA seq
DB search
MTERTAPAVPAAPSVPSVPSVPSTPDEQLDALLASPELAGVPEADRLRWAELVRAIEAAR
ADYYDAVENVADSAGTGKGIVASAISDADYDELYRQLESLQGAHPALDNALSPTRTVGGS
ATRGFPPATHHERMYSLQDVFTLEEVGEWAARMSAATGRADADLAMTAEVKIDGLAIALT
YTDGRLTRAATRGDGTTGEDITANARTIDSIPERLTGAEPEGPAGPGLPSLVEIRGEVYF
PVEEFEAFNAASRAANEKAEADDAAGRAARRGAALPVFANPRNAAAGSLRQKDPRITATR
PLAFIAHGIGAIIPGPGADLPASQHEWYELLERWGLPTSPYNAIVRGAAERQAYIDRYAE
HRHDLLHEIDGIVFKIDDRSLQDELGHTSRVPRWATAYKYPPEEVHTRLLDIGVQVGRTG
RVTPFGIMEPTRVAGSTVARATLHNAAEVARKGILIGDMVVLRKAGDVIPEILGPVVAQR
DGTEQPFVMPSDCPSCGTPLAPAKEGDVDLRCPNTRSCPAQVTERIAHIGSRGALDVEGL
GDEAAVALTQPDAGRPEAIAALAAGARLETERGSLRLEAAELGALRPSQRVDAVEALLAE
HGIIEQDPAIAGEGELFDLTAEDLRDVMVWRPVAAHGRPTGDWRLVRYFWTKAILTKDGE
VKKPAAPAKNATAMLSQLAAAKDQPLWRVLVALSIRHVGPTAARALAARFGSLDALRVAS
PEELGEVEGVGPAIAASWIEWIGVDWHAEILQRWAAAGVRTADEAPDSGAPARTLEGLTV
VVTGALEGFTRDSAKEAIVARGGKAAGSVSRKTSYVVVGANAGSKEAKARDLGLPILDEL
GFETLLAGGPTALGAMGA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgaaccgcgcccgctgtgcccgctgcgccgtcagtgccgtcagtgccgtca
gtgccgtcgacccccgacgagcagctcgacgccctcctggcctccccggagctcgccggc
gtccccgaggccgaccgcctgcgctgggccgagctcgtgcgcgccatcgaggccgcccgc
gccgactactacgacgccgtcgagaatgtcgccgacagcgcgggtaccggcaaggggatc
gtcgcctccgccatctccgacgccgattacgacgagctctaccgacagctcgaatccctc
cagggggcccacccggccctcgacaacgcgctgtcccccacgcgcaccgtcggcggcagt
gccacccggggctttccccccgccactcaccacgagcgcatgtactccctgcaggacgtc
ttcaccctcgaggaggtcggggaatgggctgcgcgcatgagcgccgccaccgggcgggcc
gacgccgacctcgccatgaccgccgaggtcaagatcgacggcctggccatcgccctgacc
tacaccgatggacgtctgacccgtgccgccacccgcggcgacggcaccaccggcgaggac
atcaccgccaacgcccgtactatcgactccatcccggagcgcctcaccggtgccgagccc
gagggccccgccggccccggcctgccctccctcgtggagatccgaggcgaggtctacttc
cccgtcgaggagttcgaggccttcaacgccgccagccgcgccgccaatgagaaggccgag
gccgatgacgccgccgggcgcgccgcccgccggggcgccgccctgccggtcttcgccaat
ccccgcaacgccgccgccggatccctgcggcagaaggacccccggatcaccgcgacccgg
cctctggccttcatcgcccacggcatcggcgccatcatccccggccccggagccgatctt
cccgccagccagcacgagtggtacgagctcctggagcgctgggggctgcccacctccccc
tacaacgccatcgtgcgcggcgccgccgagcggcaggcctacatcgaccgctacgccgag
caccgacacgacctcctccatgagatcgacggcatcgtcttcaagatcgatgaccgctcc
ctccaggacgagctcgggcacacctcccgcgtgccccgctgggcaaccgcctacaagtac
ccgcccgaggaggtccacacgcgcctgctcgacatcggtgtgcaggtcggccgcaccggg
cgcgtcacgcccttcgggatcatggagcccacgcgcgtcgccggctccaccgtcgcccgg
gccaccctccacaacgccgccgaggtggcccgcaagggcatcctcatcggcgacatggtg
gtgctgcgcaaggccggcgatgtcatccccgagatcctggggcccgtggtcgcccagcgc
gacggcaccgagcagcccttcgtcatgccctccgactgcccgtcctgcggcacccccctg
gcgcccgccaaggagggggacgtggacctgcgctgccccaacacgcgctcctgccccgct
caggtcaccgagcgcatcgctcatatcggctcacgcggcgcgctcgacgtcgagggcctg
ggggacgaggccgccgttgccctcacccagcccgacgccgggcgccccgaggccatcgcg
gcgctcgccgccggggcgcgcctggagaccgagcgggggagccttcgcctcgaggccgcc
gagttgggggccctccgcccctcccagcgcgttgacgccgtcgaggcccttctcgccgag
cacggcatcatcgagcaggaccccgccatcgcgggggagggggagctcttcgacctcacc
gccgaggacctgcgcgacgtcatggtctggcgcccggtcgccgcgcacgggcgccccacc
ggtgactggcgcctcgtccgttacttctggaccaaggcgatcctcaccaaggacggcgag
gtcaagaagccggcagcgccagccaagaacgccaccgccatgctctcccagctcgccgcc
gccaaggaccagcccctgtggcgagtgctcgtggccctgtccatccgccacgtcggtccc
accgccgcccgcgcgctcgcggcccgcttcggctccctggacgcccttcgcgtcgcgagc
ccggaggagctgggagaggtcgaaggcgtgggccccgccatcgccgcctcctggatcgag
tggatcggcgtggactggcacgccgagatccttcagcgctgggcagccgccggcgtgcgc
accgccgacgaggcccctgacagcggggcccccgctcgcaccctggagggactgaccgtc
gtcgtcaccggcgccctggagggcttcacccgcgacagcgccaaggaggccatcgtggcg
cgcggcggcaaggccgccgggagcgtgtcgaggaagacgagctacgtcgtcgtcggcgcc
aatgccggttcgaaggaggccaaggcccgcgatctcggcctgcccatcctcgacgagctg
ggattcgagaccctcctcgccggcgggccgactgccctcggcgccatgggggcatga
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