Actinomyces sp. 432: CWT12_04655
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Entry
CWT12_04655 CDS
T06433
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
actz
Actinomyces sp. 432
Pathway
actz03030
DNA replication
actz03410
Base excision repair
actz03420
Nucleotide excision repair
actz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWT12_04655
03410 Base excision repair
CWT12_04655
03420 Nucleotide excision repair
CWT12_04655
03430 Mismatch repair
CWT12_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actz03032
]
CWT12_04655
03400 DNA repair and recombination proteins [BR:
actz03400
]
CWT12_04655
Enzymes [BR:
actz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CWT12_04655
DNA replication proteins [BR:
actz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CWT12_04655
DNA repair and recombination proteins [BR:
actz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CWT12_04655
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWT12_04655
MMR (mismatch excision repair)
DNA ligase
CWT12_04655
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWT12_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
UPF0758_N
DUF4796_N
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QHO90761
UniProt:
A0A7L5AMZ4
LinkDB
All DBs
Position
1147097..1149520
Genome browser
AA seq
807 aa
AA seq
DB search
MSEARPATSAALAADLVKVPAAVRARWTELVRVIERARDAYYAAVDSQSPWSDAEYDALY
RELESLEKAYPALQLSGSPTQSVGGRPTTDFAAAPHYARMYSLQDVFDLEEVEQWAQRMA
AETGVPDAELAMTAEVKIDGLAVALTYEHGVLTRAATRGDGVVGEDVTGNVRTIASVPLV
LAGDSHPARVEVRGEVYFPVDAFHEFNERRRTENLQREAQGRPRLQVFANPRNAAAGSLR
QKNPAVTAARPLAMIAHGIGAITPAPGQQLPTTQHAWYELLESWGLPVSPYNEVVRGRAE
REAYIARYADHRHDLLHEIDGIVFKLDSQPLQDELGYTSRVPRWATAYKYPPEEVHTRLL
DIDVQVGRTGRVTPFGIMEPVLVAGSRVSRATLHNATEVARKAVKIGDMVVLRKAGDVIP
EIVGPVLERRDGSEREFTMPRNCPSCGTELAPAKEGDIDLRCPNTRSCPAQLTERIAHIG
SRGALDIEGLGDEAALALTQPDAGRAEVLAALAAGHLLETERGRLHLSASELGALHPSER
VGAAEALLSAAGASEQQPALTGEAGLFELTAADLREVFVYRPVTRGGLPTGDWRLLRFFW
SKQTYTKEGEVKKPTRPGKHATAMLAQLDAAKRQPLWRVLVALSVRHVGPTAARALAARF
GSIEQLQAAGVEELAQVEGVGPTIAAAWKDWLEVDWHQQILSRWAAAGVRMADETAPGEA
VPQTLGGLTIVVTGTLQGFTRDGAKEAIVSRGGKASGSVSKRTSYVVVGENAGSKEAKAR
ELGLPLLDEAGFETLLAGGPEALAADS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcccgccccgcaacttcagccgccctggccgccgatctggttaaggtgccc
gccgccgtgcgtgcccgctggactgaactggtcagggtcatcgagcgcgcccgcgatgcc
tactacgccgccgtggactcccagagtccctggtccgatgccgagtacgatgccctgtat
cgcgagctggagtcactggagaaggcttatccagcgcttcagctgtcgggctcgcccacc
cagtccgtgggcgggcggccgaccacggacttcgcagcggcgccgcattatgcgcgcatg
tactccctgcaggacgtgttcgacctggaagaggtggagcagtgggcgcagcgcatggcg
gcggagaccggagtgcccgacgccgaactggcgatgaccgcggaggtgaagatcgacggc
ctggcggtcgccctgacctatgagcacggcgtactgactcgcgccgccacgcggggcgac
ggcgtagtcggggaggatgtcactgggaacgtgcgtaccatcgcctccgtgccactggtg
ctggcaggtgactcgcatccggcccgggtggaggtacgcggcgaggtttacttcccggtg
gacgccttccacgagttcaatgagcgccgtcgtaccgagaacctccagcgggaggcacag
ggccgcccccgcctgcaggtattcgccaacccgcgcaacgccgctgccggctcgctgcgg
cagaagaaccccgccgtcacagccgcccggccgctggccatgatcgcccacgggattggc
gccataacgccggctcccggccagcaactgcccactacccagcacgcctggtatgagctg
ctggaatcctgggggcttccggtctccccctacaacgaggtggtacgcggacgagctgag
cgcgaggcatacattgcgcgctatgccgaccaccgccatgacctactgcatgagattgac
ggcatcgtgttcaagctggattcccagccgctgcaggacgagctgggctacacatcccgt
gtcccccgctgggccaccgcctataagtacccgcccgaggaggttcacacccgcctactg
gacatcgacgtccaggtcggccgtaccggccgcgtcacccccttcgggatcatggagccg
gtgctggtggccggttctcgcgtgtcccgggccaccctccataacgccaccgaggtagcc
cgcaaggcggtcaagatcggtgacatggtggttctacggaaagccggagacgtcatcccg
gagatcgtgggaccggtccttgaacggcgcgacggctccgaacgggagttcaccatgccg
cgcaactgcccctcctgcggaacggaactggccccggccaaggagggcgatatcgacctg
cgctgccccaatacccgctcctgcccggcgcagctgaccgaacggattgcccacatcggc
tcgcgcggcgccctggatatcgagggcctgggagacgaggccgccctggcactgacccag
cccgacgccggacgcgcagaggtcctggccgcgctcgcggcgggtcacctgctcgagacc
gagcgtggccgcctgcacttgtcggcgtccgagctgggggccctccacccctccgagcga
gtcggggcggccgaggcactgctgtccgccgctggcgcgtccgagcagcagccggcgctc
acgggtgaggccgggctgttcgagctgacggcggccgatctgcgtgaggtgtttgtctac
cggcccgtcacccgtggcgggctgcctaccggcgactggcggctactgcgtttcttctgg
tccaagcagacctacaccaaggaaggcgaggtcaagaagccgacccggccggggaagcac
gccacggccatgcttgcccagctcgatgcggccaagcgtcagcccctgtggcgagtcctc
gtggccctgtccgtgcgacacgtgggcccgacggcggcccgtgcgctggctgcccgcttc
ggctccatcgaacagctccaggccgccggcgtggaggagctggcgcaggtggagggggtt
ggcccaacgattgccgccgcttggaaggactggcttgaggttgactggcaccagcagatc
ctgtcccgctgggcggccgccggggtgcgcatggctgatgagaccgcgccgggggaggcc
gtgccccagacgctgggcggcctgaccattgtggtaactggcacgctgcagggctttacc
cgggatggtgccaaggaggccattgtctcccgcggtggcaaggcgtccggtagcgtctca
aagcggacgagttacgtcgtcgtcggcgagaacgcaggttctaaggaggccaaggcacgc
gaactgggcctgccgctgttggacgaggccggctttgagaccctgctggctggtggcccc
gaggcgctcgcagccgattcctga
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