Athene cunicularia (burrowing owl): 113483836
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Entry
113483836 CDS
T05777
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113483836 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acun03400
]
113483836 (LIG4)
Enzymes [BR:
acun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113483836 (LIG4)
DNA repair and recombination proteins [BR:
acun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113483836 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
Motif
Other DBs
NCBI-GeneID:
113483836
NCBI-ProteinID:
XP_026711591
UniProt:
A0A663MY72
LinkDB
All DBs
Position
1
AA seq
912 aa
AA seq
DB search
MASTPASQPPPKKTVASHVPFADLCSTLERIQTCKSRPEKIKYFREFLDSWRKFHDALHK
NEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTP
SGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDVIANNNAAKNKGLLKKSLLQLI
TQSTALEQKWLIRMIIKDLRLGVSQQTIFSIFHPDAVELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNYQIFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMV
EDSDLQTCFCVFDVLMVNNQKLGHEVLSKRYEILSSVFTPITGRIHVVRKKSASTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEMYIEPCNSVVVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAEGKLASKHLHIDEYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSSVNKV
SNIFEDVEFCVMTGTGKCSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPSFMIHMCPDTKEHFAREYDCYGDSYMTDTDVAQLK
DVFSRMKDHKVMPLDMIAEVEERYSWNSCHLSIFRGNTIYVDCYNVVNEPRTKIHGTMLS
IRALELRFYGAKVVSHLEEGVSHVVIGEDHSRVKQMKALRRTFGKKFKIVSELWVTQSVE
EGVAKNESQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaccagcttcccagcctcctcctaaaaaaactgtcgcctctcacgtgcct
tttgcagatctgtgttctactctggagcgaatacagacatgtaaatctcgtccggagaaa
atcaagtatttcagggagtttctggattcctggagaaaattccatgatgctcttcataaa
aatgagaaagatgtcacagattctttttatccagctatgcgacttattcttccacagttg
gaaagagaaaggatggcatacggaattaaagaaactatgcttgcaaaactgtatattgaa
ctgcttaatttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacccct
tctggctcacgtggagatgctggagattttgcaatgattgcatactttgtgttaaaacct
aggagcccaaaacaaggcagactgacaatagaacaagtcaatgaacacttagatgtgata
gctaataataatgctgctaaaaacaaggggctattaaagaaaagtcttcttcagttaatt
acccagagcacagcactggaacaaaagtggctcatcaggatgattataaaggatctaagg
cttggtgttagtcaacagactatattttccatttttcaccctgatgctgttgaattacac
aatgtcacaactgatttggaaaaagtttgtagacaactgcatgatccctcagtctccctt
agtgatgtttctatcatgttattttctgcctttaaaccaatgcttgctgctattgctgat
gtccagcaaattgagaaacaaatgaattaccagatattctacatagagactaagctggat
ggtgaacgtatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatggg
tttgactatactcagcagtttggtgcttccccgcttgatggttcattaacaccatttatt
cataatgtatttaaaagcaatatacaaaattgcattctcgatggtgaaatgatggcttac
aatcctgagacacaaacctttatgcaaaaaggaaacagatttgacataaaaagaatggta
gaggattctgatctgcagacttgcttctgtgtgtttgatgtattgatggttaacaatcag
aagttggggcacgaagtactaagcaaaagatatgaaatcttaagtagtgtatttacccca
ataactggcaggatacatgttgtacgtaaaaaaagtgccagcacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaaggaattatggtgaaagatcccatg
tccacatacaagcctgacaaacgtggagaaggctggttaaaaatcaagccggaatatgtc
aatgggctgatggatgaactagaccttttaattgttggtggttactgggggaagggctca
cgtggtggaatgatgtctcattttctgtgtgctattgcagagacaccccctccaaacgaa
aaacctactgttttccactctatttgtcgtgttggttctggctatactatgaaggaattg
tatgatctaggtttgaaactggctaagcactggaaaccctaccataggaaggaccctccc
tgtaacattttgtgtggaactgaaaaacctgaaatgtacattgagccttgcaactctgtc
gttgttcagatcaaggcagccgagattgttaacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgagaagataagagaggacaaagaatggtacgagtgtatgact
tcagacatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcacctt
catatagatgagtatgatgagcctcaagagaaaaaaaggaaaactgtatcaaaggtgaag
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaaacaaggtt
tcaaatatatttgaagatgttgaattttgtgttatgacaggaacaggaaagtgctcaaag
tctgagctggaaagcagaatagctgaatgtggtggtagtgtggtacagaacccagggcca
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcctcc
aacaaatacgatgtggtgagggcagagtggctccttcagtgttttcaaaccaaaatgctg
gtgccttggcagccatcctttatgattcacatgtgtcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacatgacagacacagatgttgcacaactcaag
gacgtgttctcaagaatgaaagaccataaggtgatgcccttggacatgatagcagaggta
gaagaacgttattcatggaacagctgtcatctcagtatattcagaggaaacactatttat
gtggactgttacaatgttgttaacgagccaagaaccaaaatccatggaacgatgctatca
attagagctttggagctccgtttttatggtgcaaaagtggtctctcaccttgaagagggt
gtctctcatgttgttataggggaagatcattcccgggtaaaacagatgaaagcactcagg
agaacatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacgcagtcagtggag
gaaggagttgcaaagaatgaaagtcagtacttaatttaa
DBGET
integrated database retrieval system
