Athene cunicularia (burrowing owl): 113486070
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Entry
113486070 CDS
T05777
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113486070 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acun03000
]
113486070 (KDM2B)
04121 Ubiquitin system [BR:
acun04121
]
113486070 (KDM2B)
03036 Chromosome and associated proteins [BR:
acun03036
]
113486070 (KDM2B)
Enzymes [BR:
acun01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
113486070 (KDM2B)
Transcription factors [BR:
acun03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113486070 (KDM2B)
Ubiquitin system [BR:
acun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113486070 (KDM2B)
Chromosome and associated proteins [BR:
acun03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113486070 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
113486070 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_At5g56370
LRR_4
Motif
Other DBs
NCBI-GeneID:
113486070
NCBI-ProteinID:
XP_026715523
LinkDB
All DBs
Position
15
AA seq
1250 aa
AA seq
DB search
MYHGDFVHAMDGKDFTFEYVQREALRVPLIFRNKDGLGIKMPDPDFTVRDVKLLVGSRRI
VDVMDVNTQKGVEMSMSQFVRYYETPEAQREKLYNVISLEFSHTKLENIVKRPNVVDLVD
WVDNMWPQHLKARQTDATNAISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRG
GKIFWLIPPTLQNLELYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVY
TPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVHAKFRYPFYYEMCWYVLERYVSCVTQR
CHLSKEYQKESMLIDAKRKRSTDSYSSDSWLDMDEESCDAHIREEKDDSLDKNSKSLVDG
SSSPNSTHSEGKESAGRKQKATVMRYLKRTLSNESDDSVKSTTPTDYPKTPTGSPATEVS
TKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEDMKNILKEHADDDQNLA
ISGVPVVSWPKKTTKNRAVGRPKGKLGTASAVKLAANRTTAGARRRRTRCRKCEACLRTE
CGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEESKFNL
MLMECSICNEIIHPGCLKVKESDGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKYA
SNLPGSLLKEQKMNRDNKEVTDAAKRKGDCEETPRRKSEEHSKKTPVDSILRRKSDEVHL
WRKRKFEKPQEPTMRKRLKLGKEDKLFRKKRRSWKAPDDRTAMIKPLRRLKQEPEDDLPE
APPRSKDSDQSRSSSPTAGPSTEGAESRDKKKFKMRRKRRLPNKELSKELSKELNQEIQK
TENSLANENHQPIKSEPESENEEPKRALNNSERLHRFSKGLNGTPRELRHQLIPSLRSTP
RGITRPPPSLSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMQREVWMAVFSYLSHR
DLCICMRVCKTWNRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQ
LSWLINRLPGLRDLLLSGCSWIAVSALCSSSCPLLRTLDVQWAEGLKDAQMRDLLSPPTD
NRPGCNGCTLESMETLSSSSGKEQFCGSCHIRPDISSGQIDNRSKLRNIVELRLAGLDIT
DASLRLIIRHMPLLSKLNLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCL
SYFKRCGNICQIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacggggatttcgtgcatgccatggacgggaaagattttacttttgagtatgtg
caaagagaagctctcagagttccccttatcttcagaaataaggatggactgggaattaaa
atgcctgacccggatttcaccgtcagagatgtgaagctattagtgggaagccgaaggata
gtggatgtgatggatgtgaacacgcagaagggtgttgaaatgagcatgtctcaatttgtg
agatactatgaaacaccagaggcccagcgtgaaaaactctacaatgtcatcagcctggag
ttcagtcacacgaagctggagaacattgtcaagcgccccaatgtggtggacttggttgac
tgggtggataatatgtggccacagcatttgaaggcgagacagacggatgctaccaatgct
atttcagagatgaaataccccaaagtgaaaaagtactgtttgatgagtgtgaaaggatgc
ttcactgattttcatattgattttggtggcacttcagtgtggtatcacgttttccgtggg
gggaagatcttctggctgattccgcctactctgcagaatctagaactttatgaagaatgg
gttctctcaggaaagcaaagtgatatctttctgggagacagggtggaacgatgccaaaga
attgagctgaaacaaggctatacgttcttcattccttcagggtggatacatgcggtttat
actccagtagattctctggtgtttggtggaaatatcctgcatagctttaatgttcccatg
cagcttcgcatctatgaaattgaggacagaacaagggtgcatgccaaattccgttatcct
ttctactatgaaatgtgctggtatgttctggagagatacgtgtcctgtgtgacccagcgc
tgccacctcagcaaagagtaccagaaagaatcaatgttaattgatgcaaaaagaaaacgc
agcacagacagctactcatcagattcgtggttagacatggatgaagaatcgtgtgatgcc
catatccgtgaggagaaggatgacagcttggataagaactccaaatccttggtagatggc
tcctcctcacccaacagcacacactcggaagggaaggagagcgcaggaagaaaacaaaaa
gccacagtaatgagatacctaaaaagaactttgtctaatgagtcagatgacagcgtaaaa
tcaacgacccccacggactatcccaaaacaccaacggggtctccagctacagaagtttca
accaaatggactcacctcacggaatttgaactgaagggtttaaaagccctggtggaaaag
cttgaatctctcccagagaacaaaaagtgtgttccagaaggcatcgaagatccacaggct
ctcctagaggacatgaagaacatactgaaggaacacgctgatgatgaccaaaatcttgcc
atttcgggtgtccctgtggtcagctggcccaagaagaccacaaagaacagggcagtcgga
cggcccaaagggaagctgggcactgcttccgcagtgaagctcgcagctaaccggacaacc
gccggagcgcgccggaggaggacgcgatgccgcaagtgcgaggcgtgtctgcggacagag
tgcggcgagtgtcacttctgcaaagacatgaagaaatttgggggacctggcaggatgaag
cagtcctgcattatgaggcagtgtatcgcaccggtgttgcctcatactgctgtgtgtctg
gtgtgcggagaagctgggaaagaggacactgtggaagaggaggagagcaagtttaatctc
atgctaatggaatgctccatttgtaatgaaatcatacacccaggatgccttaaggtgaag
gaatcggatggtgtggttaacgatgagctgccgaactgctgggagtgtccaaagtgcaac
cacgcagggaaaactggaaaagcgtacaagcaaaagcgcggaccaggattcaaatacgca
tcaaatctcccaggctcattgctgaaggaacagaaaatgaacagagacaataaggaagta
acagatgctgcaaaacggaaaggggattgtgaagaaactcccaggcggaaatcagaggaa
cattccaaaaagactccagttgactcaatactgaggagaaagtcagatgaagtgcatctg
tggagaaaaaggaaatttgagaaaccccaggaacccactatgagaaagcggctaaaactt
ggaaaagaagacaaactcttcaggaagaagcggcgatcgtggaaggctccagatgaccga
actgccatgatcaaacccctgcggcgcctgaagcaggagcccgaggacgacctgccggag
gcgcctccccgctccaaggacagcgaccagtcgcggtccagctcgcccactgcaggtccc
agcacggagggcgccgagtccagggacaagaagaagttcaagatgaggaggaaaaggcgg
cttcccaataaggaactgagcaaggagctcagcaaggagcttaaccaggagatccaaaaa
accgagaacagccttgccaacgagaatcaccaacccatcaaatctgaacctgagagcgag
aatgaggaacctaagcgtgctttgaacaacagtgagagactccataggttcagcaaaggg
ttaaacgggactccccgggagctgaggcaccagctcatccccagcctgcggagcacacct
cggggaataacccggccaccgccttcgctctctcctcccaaatgcattcagatggaacgg
cacgttatccggccgcctcccatcagcccccctccggactcgctccccctggatgacggg
gcagcccacgtgatgcagcgggaagtctggatggctgtctttagctacctcagtcataga
gacttgtgcatctgtatgagagtttgcaagacctggaacagatggtgctgtgacaaaaga
ttatggaccaaaatagatttaaaccattgtaaatccatcactccacttatgcttagtggc
attattaggagacagcctgtaacccttgatcttagctggacaaatatatctaaaaagcag
ctgagttggcttatcaacagactgccaggtcttcgggacctgctgttatcagggtgctcg
tggatagcagtgtcggcactttgtagttccagttgtcctttactccgaactctggacgtg
cagtgggcagaaggactgaaagacgcacaaatgagagacctcttgtcaccgcccacagat
aaccggccaggctgcaacgggtgtactttagagagtatggaaacactttcttccagttca
gggaaggagcagttctgtgggtcatgccacattcgcccggatatcagctcaggtcagatc
gacaaccggagtaaactacggaacatagttgagctgcgcttggctggcctggatattaca
gatgcttctttgcggctgatcataaggcacatgcctctgctctccaaactcaatcttagt
tactgtaatcacgtgacagatcagtctattaacctgctgaccgcggtcggaaccaccacg
cgggattcactaacggaaattaatttatcagactgcaataaggttactgaccagtgcctg
tcttactttaaacgttgtggaaacatctgccagatcgacctgaggtactgcaagcaagtg
acaaaagagggctgcgagcagttcatagcggagatgtccgtaagtgttcagtttgggcaa
gtggaagaaaaacttctgcaaaaactgagttag
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integrated database retrieval system
