KEGG   Athene cunicularia (burrowing owl): 113487865
Entry
113487865         CDS       T05777                                 
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113487865 (TARDBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acun03019]
    113487865 (TARDBP)
Messenger RNA biogenesis [BR:acun03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     113487865 (TARDBP)
SSDB
Motif
Pfam: TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 Nup35_RRM_2 DUF4651 RRM_11
Other DBs
NCBI-GeneID: 113487865
NCBI-ProteinID: XP_026718574
UniProt: A0A663LN29
LinkDB
Position
21
AA seq 414 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQ
REQNQGFSSGNNSYGGSNSGAAIGWGSASNTGSSSGFNGGFGSSMDSKSSGWGM
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcggagtatatccgggtgacggaggacgagaacgatgagcccatcgagatcccctcg
gaggacgacggcaccgtgctgctctccaccgtcaccgcccagttccccggggcctgcggg
ctgcgctacaggaacccggtgtcgcagtgcatgaggggcgtgcggctggtggaaggcatc
ctgcacgcgccagaagccggatggggaaacctggtctatgttgttaattatcccaaagat
aataagagaaaaatggatgaaacagatgcatcgtcagcggtaaaagtgaaacgagcagta
cagaagacttcggatttaatagtcttgggtcttccctggaaaaccactgaacaagactta
aaggaatatttcagtacatttggagaagttctgatggtgcaggttaagaaggatattaaa
actggccactcaaaagggtttggttttgttcggtttacggattatgaaacccaggtgaaa
gtcatgtctcagcggcacatgatcgatggaagatggtgtgactgtaaacttcccaattct
aagcaaagtcctgatgaacctttgcgtagcagaaaggtgtttgtcgggcgctgcactgag
gacatgacggcagatgagctccggcagttctttgcccaatacggagaagtagtagatgtc
ttcattcctaaaccgttccgagcttttgcttttgtcacatttgcagatgatcaggttgcc
caatctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagagcgaggtggaagatttggtggtaatcca
ggaggctttgggaatcaagggggctttggcaacagcagaggaggtggggggggtctgggt
aacaaccagggcagtaatatgggtggagggatgaactttggagcctttagcatcaaccct
gccatgatggcggcggcgcaggcagccctgcagagcagctgggggatgatgggcatgctg
gctagtcagcagaaccagtcggggccatcggggaacaaccagcctcaaggcaacatgcag
cgggagcagaaccagggctttagctcaggaaataactcctacggcggctccaactcgggg
gcagccataggctggggttcagcctcgaacacgggctccagcagtgggtttaacggaggc
tttggttcaagcatggattccaaatcgtcaggctggggaatgtag

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