Athene cunicularia (burrowing owl): 113487865
Help
Entry
113487865 CDS
T05777
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
acun
Athene cunicularia (burrowing owl)
Pathway
acun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113487865 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acun03019
]
113487865 (TARDBP)
Messenger RNA biogenesis [BR:
acun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113487865 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
Nup35_RRM_2
DUF4651
RRM_11
Motif
Other DBs
NCBI-GeneID:
113487865
NCBI-ProteinID:
XP_026718574
UniProt:
A0A663LN29
LinkDB
All DBs
Position
21
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQ
REQNQGFSSGNNSYGGSNSGAAIGWGSASNTGSSSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtatatccgggtgacggaggacgagaacgatgagcccatcgagatcccctcg
gaggacgacggcaccgtgctgctctccaccgtcaccgcccagttccccggggcctgcggg
ctgcgctacaggaacccggtgtcgcagtgcatgaggggcgtgcggctggtggaaggcatc
ctgcacgcgccagaagccggatggggaaacctggtctatgttgttaattatcccaaagat
aataagagaaaaatggatgaaacagatgcatcgtcagcggtaaaagtgaaacgagcagta
cagaagacttcggatttaatagtcttgggtcttccctggaaaaccactgaacaagactta
aaggaatatttcagtacatttggagaagttctgatggtgcaggttaagaaggatattaaa
actggccactcaaaagggtttggttttgttcggtttacggattatgaaacccaggtgaaa
gtcatgtctcagcggcacatgatcgatggaagatggtgtgactgtaaacttcccaattct
aagcaaagtcctgatgaacctttgcgtagcagaaaggtgtttgtcgggcgctgcactgag
gacatgacggcagatgagctccggcagttctttgcccaatacggagaagtagtagatgtc
ttcattcctaaaccgttccgagcttttgcttttgtcacatttgcagatgatcaggttgcc
caatctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagagcgaggtggaagatttggtggtaatcca
ggaggctttgggaatcaagggggctttggcaacagcagaggaggtggggggggtctgggt
aacaaccagggcagtaatatgggtggagggatgaactttggagcctttagcatcaaccct
gccatgatggcggcggcgcaggcagccctgcagagcagctgggggatgatgggcatgctg
gctagtcagcagaaccagtcggggccatcggggaacaaccagcctcaaggcaacatgcag
cgggagcagaaccagggctttagctcaggaaataactcctacggcggctccaactcgggg
gcagccataggctggggttcagcctcgaacacgggctccagcagtgggtttaacggaggc
tttggttcaagcatggattccaaatcgtcaggctggggaatgtag
DBGET
integrated database retrieval system