Anabaena cylindrica: Anacy_0993
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Entry
Anacy_0993 CDS
T02435
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acy
Anabaena cylindrica
Pathway
acy03030
DNA replication
acy03410
Base excision repair
acy03420
Nucleotide excision repair
acy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Anacy_0993
03410 Base excision repair
Anacy_0993
03420 Nucleotide excision repair
Anacy_0993
03430 Mismatch repair
Anacy_0993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acy03032
]
Anacy_0993
03400 DNA repair and recombination proteins [BR:
acy03400
]
Anacy_0993
Enzymes [BR:
acy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Anacy_0993
DNA replication proteins [BR:
acy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Anacy_0993
DNA repair and recombination proteins [BR:
acy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Anacy_0993
NER (nucleotide excision repair)
GGR (global genome repair) factors
Anacy_0993
MMR (mismatch excision repair)
DNA ligase
Anacy_0993
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Anacy_0993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
RNA_pol_A_CTD
Zn_ribbon_NUD
Auto_anti-p27
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AFZ56568
UniProt:
K9ZBI5
LinkDB
All DBs
Position
complement(1173280..1175325)
Genome browser
AA seq
681 aa
AA seq
DB search
MIPTQAEVKRIEEIRRLLQQASYAYYVLDAPIMEDTVYDRFYRELQELETQYPELITPDS
PTQRVGERPATHFTSVRHNIPLYSLENAFNVEELQSWEQRWRRHLPSQYSPGDIEYVAEL
KIDGAALALTYENGVLTRGVSRGDGVMGEDITQNVRTIRSIPLRLNFDGLANIEKVEVRG
EVFLPLDVFQQINEKRQKAGEQVFANPRNAAAGTLRQLDPRIVAQRQLDFFAYTLHITGL
DDSSIANTQWEALELLQKMGFRVDANHKLCHTLEEVAEYYQYWDTERLNSAYMTDGVVVK
LNSFRLQEQLGFTQKCPRWAIALKYAAEEAPTRVERITVNVGRTGALTPLAEMLPVQLAG
TTVSRATLHNSDRITLLDIRIGDTVIVRKAGEIIPEVVRVIKELRPADTQPFIMPTHCPV
CGQPVVRESGEAVTRCVNASCAAILKGEIEHWVSRDALDIKGVGEKLVHQLVDKGLVHSV
GDLYDLTPEKLCALERMGQKSAEKLVSAIAKSKNKPWSRVLYGLGIRHVGSVNAQLLTEK
FTTVEQLTAARQSDIEGVYGIGAEIAQSVYQWFRISANQTLISRLQAIGLQFISTEEPKA
AGDINEKFAGKTFVVTGTLPTLKRDEAKALIQKAGGKVTDSVSKKTDFLVVGEDAGSKLE
KAQALEITQLSEAQLLEMLKI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgataccaactcaagccgaagtaaagcgtatagaagaaatccggcggttattacaacaa
gccagctatgcttattatgtcctggatgcaccaatcatggaggatactgtctatgatcgg
ttttatcgggaattacaagaattagaaactcagtatccagaattaatcactcctgatagt
cctactcaacgggtgggtgagcggcctgcaacgcattttacttcggtacggcataatatc
cctttgtatagtttggaaaatgcttttaatgttgaggagttacaaagctgggaacaacgt
tggcgaagacacttgccatctcagtattctccgggtgatatagaatatgtggcagaattg
aaaattgatggtgcggctttagcgttaacttatgaaaatggtgttttaactagaggtgtg
agtcggggtgatggggtgatgggtgaagatattacccaaaatgtgcggactattcgctca
attcccctgcgtttgaattttgacgggttagcaaatatcgaaaaggtagaagtgcggggt
gaggtttttttacctttagatgtatttcaacaaatcaatgagaaaaggcaaaaagcaggt
gaacaggtgtttgctaatccccgcaatgctgctgctggtacacttagacagttagatccc
cggattgtagcacagcgacagctagatttctttgcttatacgctacatattacagggttg
gatgattctagtattgctaatactcaatgggaagctttggagttgttgcaaaaaatgggt
tttcgggttgatgccaatcataagctgtgccatacattagaggaagttgctgaatattat
caatattgggatacggaaaggctaaattcggcttatatgactgatggggtggtggtaaag
ctaaattcgtttaggctacaagaacagttaggttttacgcagaaatgcccccggtgggcg
atcgctctcaagtatgcagcagaagaagctccaacccgtgtggaacggattacagtgaat
gtggggagaacgggagcgttaactcctttagcggaaatgttgcctgtacaattagcgggg
actactgtttctagggctactttacataatagcgatcgcatcaccctattagatatccgc
attggtgatactgtcattgttcgcaaagctggggaaattatcccggaagtggtgcgggta
attaaagaattgcgccccgctgatactcaaccttttattatgcctacccattgtcccgtc
tgtggtcaacctgtagtgcgggaatcgggggaagcggtgacacgatgtgtaaatgcttcc
tgtgcggcaattctcaaaggtgaaattgaacattgggtaagtcgtgatgctttggatatt
aaaggtgtcggtgaaaaactggtacatcaactggtagataaggggttggtgcattctgtt
ggtgacttatatgacttgacaccagaaaaattatgtgcattggaacggatggggcagaag
tcagcggaaaaattggtgagtgcgatcgctaaatcaaaaaataaaccttggtcaagggta
ttatatggtttaggtattcgtcatgttggtagtgtcaacgcccaattattaacggaaaaa
tttaccacagttgaacagttaacagcagctagacaatcggatattgaaggcgtttatggt
attggtgcagaaattgcccaatcagtttatcaatggtttcgcatcagcgctaatcaaacc
ttgatttctcgtctccaagcaatcggtttgcaattcatttccaccgaagaaccgaaagca
gcgggtgatattaatgaaaaatttgctggtaaaacctttgtagttacaggtactttacca
accttaaaacgcgatgaagcaaaagcactaattcaaaaagctggtggtaaagtcacagat
tctgtcagtaaaaaaactgactttttagttgtgggtgaagatgccggttctaaattagaa
aaagcgcaggctttggaaattactcagttaagtgaagcacaattattagagatgttaaag
atttaa
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