Anser cygnoides (swan goose): 106030933
Help
Entry
106030933 CDS
T04896
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04010
MAPK signaling pathway
acyg04020
Calcium signaling pathway
acyg04260
Cardiac muscle contraction
acyg04261
Adrenergic signaling in cardiomyocytes
acyg04270
Vascular smooth muscle contraction
acyg04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106030933 (CACNA1C)
04020 Calcium signaling pathway
106030933 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
106030933 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
106030933 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
106030933 (CACNA1C)
04270 Vascular smooth muscle contraction
106030933 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acyg04040
]
106030933 (CACNA1C)
Ion channels [BR:
acyg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106030933 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
106030933
NCBI-ProteinID:
XP_066846339
LinkDB
All DBs
Position
1:66312605..66795265
Genome browser
AA seq
2217 aa
AA seq
DB search
MFQAFVRQAYQPLSSHQQGEPETKYKGKLVHETQLNCFYIKPGGSNYGSPRPAHANMNAN
AAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTASSTQRKRQQYGKQKKQG
TTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSN
ATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILE
QATKADGGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIAL
LVLFVIIIYAIIGLELFMGKMHKTCYHVQGGLIDTPAEDDPSPCAPQSAHGRQCQNGTEC
KAGWEGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFG
SFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENE
DEGMDEEKPRNRSTPSGLPDKKKGKFAWFSHSTETHVSMPTSETESVNTDNVPGADIEGE
NCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYN
QPDWLTEVQDTANKVLLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVE
TKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSL
LGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGM
LVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKK
QEIEKTAVEEETKEEKIELKSITADGESPPATKINMDDYQPNENEEKSPYPTTEAPAEED
EEEPEMPVGPRPRPMSELHLKEKAVPMPDASAFFIFSPNNRFRVHCHRIVNDNIFTNLIL
FFILLSSISLAAEDPVRHLSFRNQILFYFDIVFTVIFTIEIALKILGNADYVFTSIFTLE
IILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLR
AINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYSCTDSSKQTAA
ECRGYYITYKDGEVNQPMIQPRSWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDS
HMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQR
QCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCMF
KEAMNILNMLFTGLFTVEMVLKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEVNPAE
HTQCSSSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLI
VMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLP
DKKCDPESEPANSTEADHSCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWS
ILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMN
MPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPP
AGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRR
AISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSAFPQTFTTQRP
LHINKSGNNQGDTESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALCRFPSPPSYPST
VSTVEGHGAPLSPTIRVQEAPWKLPSKKTHYYETLGRSSSRDSQLAIVCQEEVSQDETYD
ENLNEDIEYCSEPSLLSTEMLSYQDDENRQLTPPENNKGEDTRHSPKKGFLRSSALGRRA
SFHLECLKRQKNQGVDVSQKTVLPLHLVHHQALAVAGLSPLLQRSHSPTMFSRLCATPPA
TPCSRGWPQQAIPTLRLEGAESSEKLNSSFPSVHCSSGFPDGTGCSSPRRARPVSLTVPS
QSAGSSRQFHGSASSLVEAVLISEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADN
ILNGNSKQSPNGNLLPFVNCRDAGQDSAGEEEEEVQSPDCRKSQEELKDSRIYISSL
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcctttgttcggcaagcatatcaaccactatccagccaccagcaaggggaa
cctgaaacgaagtataaggggaagctggtgcatgaaactcagcttaactgcttctacatc
aaacctggaggttccaactatgggagtccccgtccagctcatgccaacatgaatgccaat
gcagctgcagggcttgccccagagcatatccctactccaggggcagctctgtcctggcaa
gctgcaattgatgctgccaggcaagccaaattgatgggtagtgctggcaatgcaacaata
tccacagctagctccacgcagagaaaacggcagcagtacgggaaacagaaaaaacagggt
accaccacagctacacgtcctccccgggcactgctgtgtttaacactgaaaaatcccatc
cggagggcatgcatcagcatcgtcgaatggaaaccatttgaaataattattttactgact
atttttgccaattgtgtggccttagctatctatatcccctttccagaagatgattccaat
gccaccaattccaatctggaacgagtggaatatctctttctcataatttttacagtggaa
gcatttttaaaagtaatagcatatggactcctctttcaccccaacgcttacctccgcaat
ggctggaatttactagattttataatcgtggtcgtagggctttttagtgcaattttagaa
caagcaaccaaagcagatggggggaattcaataggaggaaaaggtgccggatttgatgtt
aaagcactgcgggctttccgagtattgcgtccgttacggctggtgtctggagttcctagt
ctccaggtggttttaaactcaattatcaaggccatggtccctttgttgcatattgccctg
ctggtgctgtttgtcattattatctatgccatcattggactggagttattcatgggaaag
atgcataagacctgctaccatgtgcaaggggggctgatagatacacccgcagaagatgat
ccgtctccctgtgccccccagtctgcacatgggcggcagtgtcagaatggcaccgaatgc
aaagcaggctgggaaggacccaagcacggcattacgaactttgacaattttgcttttgcc
atgctgacggtgtttcagtgcatcacgatggagggctggacagatgtactctactggatg
caggacgctatgggctatgagttaccatgggtgtattttgtcagtctggtcatctttgga
tcctttttcgttctaaatctggttcttggtgtgttgagcggggagttttccaaagaaaga
gagaaggctaaggctcgtggtgatttccagaagttacgggaaaagcaacagctggaggag
gatttgaagggatatttagactggataactcaagctgaagacattgacccagaaaatgaa
gatgaaggcatggatgaggagaagcctcgaaacagaagcactccgtctggcttgcctgat
aagaagaaaggaaagtttgcttggtttagtcactccacagaaacccatgtgagcatgccc
accagtgagaccgagtccgtgaacacagacaacgtccctggagcagatattgaaggcgaa
aactgcggtgctaggctagcgcatcggatctccaaatctaagtttagtcgctactggcgc
cggtggaatcgattctgcagaagaaagtgccgtgccgctgtcaagtccaatgttttctac
tggttggtgatcttcctcgtgtttcttaacacccttactattgcctctgaacactacaac
cagcctgactggctcactgaggttcaagacactgccaataaggtgctgctagctcttttc
acggcagagatgctgctgaagatgtacagccttggtctacaggcctattttgtgtccctc
ttcaaccgctttgactgtttcattgtgtgtggaggaatcctggaaacgattctggttgag
acaaagatcatgtcaccactgggcatttcagtgttgagatgtgttcggctattaagaata
tttaaaatcacaagatattggaactccctgagcaaccttgtggcttcactcctgaattca
gttcgctccattgcttccctgctgctgctcctcttcctcttcattatcatcttctcactc
ctggggatgcagctctttgggggcaagtttaactttgacgaaatgcagaccaggaggagt
acatttgacaacttcccccagtccctcctcactgtgtttcagatcctgactggggaggac
tggaattcggtgatgtatgatgggatcatggcttatggcggcccctcttttccaggaatg
ttggtctgtatttacttcatcatcctcttcatctgtggaaactatatcctgctgaatgta
tttttggctattgctgtggacaaccttgctgatgccgagagtttaacatctgcacaaaaa
gaggaggaagaggaaaaagaaaggaaaaagttagctaggactgctagtcctgaaaagaaa
caggagatagaaaaaacagctgtggaggaggagacaaaggaggagaaaattgagctgaaa
tcaatcactgctgatggagaatccccgcctgctaccaagatcaacatggatgattatcag
ccaaatgaaaacgaagaaaagagcccatatcccacaacagaagcaccagcagaggaagat
gaggaagaacctgagatgcctgttggccctcgacctcgcccaatgtctgaactgcacctc
aaggaaaaggctgtgcccatgcctgatgccagtgcttttttcatcttcagtcctaacaac
aggtttcgtgtccactgccatcgaatcgttaatgataacattttcaccaacctgatccta
tttttcatcttgctcagcagcatctccctggcagctgaggaccccgtccgacacctctcc
tttaggaaccaaattctcttttattttgatatagtttttactgtcattttcaccattgaa
attgctctgaagatcctaggcaatgcagactatgtcttcactagtatctttacattagaa
attattcttaagatgaccgcatacggagctttcctccataagggctccttctgcagaaac
tatttcaacatcttagacctgctggtggtcagcgtttctctcatctcctttgggatccag
tccagtgccatcaatgtggtgaagatcctgcgtgttttgcgagtacttagaccactgagg
gccatcaacagagccaaagggctaaagcatgtggtccagtgtgtgtttgtcgccatccga
accatcggaaacattgtgattgtcacaactttgctgcagttcatgtttgcctgcattgga
gttcagttgttcaagggcaaactctatagctgcactgatagctccaagcagacagcagca
gaatgcagagggtactacattacatacaaggatggtgaggtcaaccagccaatgatccag
ccccggagctgggagaacagcaagtttgactttgacaacgtcttgactgccatgatggcc
ctcttcactgtctcgacctttgagggctggccagagttgctgtataggtccattgattcc
cacatggaggatgtgggacccatctataatcacagggttgagatctccatcttctttatt
atctacatcatcatcattgctttcttcatgatgaacatcttcgttggtttcgtcatcgtc
acatttcaggaacaaggagaacaagaatacaagaactgtgagctggacaagaaccagcgc
cagtgtgtagaatacgccctgaaggcccggcccctgcggagatacatccctaaaaaccag
tatcagtacaaagtttggtatgtggtcaactccacctattttgaatacctgatgttcgtt
ttgatcctgctgaacaccatctgcctggccatgcaacactacggtcagagctgcatgttc
aaggaagccatgaacatcctcaacatgcttttcactggcctcttcactgtcgagatggtc
ctgaaattaatcgccttcaaacctaagcactatttctgtgatgcatggaatacatttgac
gccttgattgttgtgggtagcattgttgatatagcaatcaccgaggtgaacccagctgaa
catacccaatgttcttcctctatgaacgcagaggaaaactctcgcatctcaatcaccttc
ttccgactcttccgcgtgatgcgtcttgtgaagctcctgagccgaggggagggcatccgg
acgctactttggaccttcatcaagtccttccaggctctcccctatgtggctcttttaata
gtgatgctattcttcatctacgctgtgatcgggatgcaggtgtttggtaaaattgcactg
aacgataccacagaaatcaaccgcaacaacaacttccagaccttcccccaagcagtgctg
ctgcttttcaggtgtgccactggcgaggcctggcaggaaatcatgctggcatgtctccca
gacaagaagtgcgacccggagtcggagccagccaactccaccgaagccgaccactcctgc
ggcagcagcttcgccgtcttctacttcatcagcttctacatgctctgtgccttcctgatc
atcaatctttttgtagctgttataatggataactttgattacctgacacgggactggtcc
attttaggaccacaccacctggatgagtttaaaaggatctgggcagagtatgaccctgaa
gccaaggggcggatcaagcacttggacgtggtgacactgctccggcgcattcagcccccc
ctgggctttgggaagctctgcccccaccgagtggcttgcaaacgccttgtctccatgaat
atgccactgaacagtgatggaactgtgatgttcaatgccactctctttgcattggtcaga
acagcactgaggatcaagacagaaggtaacctggagcaagccaatgaagagcttagagca
ataattaagaagatctggaagcgcaccagcatgaagctgctggaccaggtggtgcccccc
gcaggtgatgatgaggtgactgtcgggaagttctacgctactttcctgattcaagaatat
ttccggaaattcaagaaacgcaaagaacagggcctggtgggcaagccgtcccagcgcaat
gccctctccttacaggctggtttgcgcacacttcacgacatcgggccagagatccgacgg
gcgatctcgggagacctgacagctgaagaagagctagataaggccatgaaagaagctgtt
tctgctgcctctgaagatgatattttccggagagctggaggcctatttggaaaccatgtc
agctactaccaaagtgatggcaggagtgcattcccccagacattcaccacccagcgacct
ctgcacatcaacaagtccggcaacaaccagggagacactgagtctccatctcacgagaag
ctggtggactccaccttcactcccagcagctactcatcttcaggctccaatgccaacatc
aacaatgccaacaacactgccctgtgccgcttccccagcccacccagctaccccagcact
gtcagcacagtggaaggccacggggccccattgtcacccaccatccgtgtgcaggaagct
ccttggaaactaccttccaaaaagacgcattactacgaaacactgggacgctccagttcc
agagacagccagctggcaattgtttgccaagaggaagtgtctcaggatgagacttatgat
gaaaatttgaatgaagacattgagtactgtagtgaaccaagtctgctctctactgaaatg
ctttcataccaagacgatgaaaacagacaacttactccaccagaaaacaacaaaggagag
gacacccggcactctccaaagaaagggtttctgcgctcctcagcactaggtcgaagagca
tcttttcacttagagtgtctgaaaagacagaaaaaccagggcgtagacgtctcgcagaag
acagttctgcctttacatctggtacatcatcaggcgctagcggtggccggcctgagcccc
ctcctgcagcgaagccattcccccaccatgttctcccggctgtgcgcaacgccgcccgcc
acgccctgcagccgcggctggccgcagcaggccatccccacactgcgtctcgagggggca
gagtccagcgagaagctcaacagcagcttcccatcagtgcactgcagctccggcttcccc
gatggcaccggctgcagcagcccgaggagagccaggccggtctccctcaccgtccccagc
cagagcgcagggagcagcaggcagtttcacggcagcgccagcagcctggtggaagcggtc
ttgatttcggaaggactgatgcagtttgctcaagatccaaaattcattgaggtcacaacc
caggagctcgcagacgcctgcgacatgacgatagaagagatggaaaatgcagcagacaac
attctcaatggtaacagcaagcagagccccaatggcaacctcttgccttttgttaactgc
agggacgcagggcaggacagtgcaggcgaggaagaggaagaggtgcagagcccggattgt
agaaaaagtcaggaggagctcaaggacagcaggatttatatcagcagcctgtag
DBGET
integrated database retrieval system
