Anser cygnoides (swan goose): 106036949
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Entry
106036949 CDS
T04896
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04115
p53 signaling pathway
acyg04210
Apoptosis
acyg05164
Influenza A
acyg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106036949 (APAF1)
04115 p53 signaling pathway
106036949 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
106036949 (APAF1)
05168 Herpes simplex virus 1 infection
106036949 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
APAF1_C
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
NB-ARC
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
DSE1_N
CARD
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IFT140_1st
CARD_2
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SCAP
ASA1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Tricorn_2nd
Beta-prop_Nup120_160
WHD_Dark
AAA_16
Beta-prop_WDR11_2nd
nSTAND6
AAA_22
DUF2415
PAC11
WDR54
LRRC37
Motif
Other DBs
NCBI-GeneID:
106036949
NCBI-ProteinID:
XP_047917028
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All DBs
Position
1:complement(47005255..47042290)
Genome browser
AA seq
1248 aa
AA seq
DB search
MDVKSRNYLLMNRQALERDIKTSYIMDHMVTDQVLTLQEEEKVKQQNTQKERAAMLINII
LEKDNNSYRSFYNALLHEGYRDLAALLQDGIPVFSSGNGKSSLDGMTSYVKRILCEGGVP
QRPVVFVTRPKLVDAIKQKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLAHEKGLEVLSLFVN
MKISELPEQANCIIRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLDNDFKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQKFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNMPIPSQEDC
MYWYNFLAYHMAGANMQKELRELMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSIA
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLRAQSETGAFYLEWINKKS
LKNLSRLVVRPHRDAVYHACFSQDRQRIASCGADKTLQVFKTESGEMLLEITAHEDEILC
CAFSADDKYVATCSADKKVKIWNSRTGKCMHIYEEHTEQVNCCQFNNRSGQYLLATCSND
TFIKLWDLKGKYCRNTMFGHVNSVNHCRFSPNDEYVASCSTDGTVKLWEVRSANELKTIE
IKDFFQNADEQDDVEVLVKCCSWSRNSDMILAVAKNKLLLFDVKTSNLLTQVIVSHHSTI
QYCDFCAGDELVAVALSHCSVELWNIKSLSKVADCRGHMSWVHCVTFSPDGSLFLTSSDD
QTIRIWETNKVCKSSDAVLKSELDAVFHNGEVMILAIYNQKYIQLINGNTDNIIMQTEPQ
ESLICCCCLSEDLKFAAFGQENGTVKVLQLLDGKVLKYREAYRTSVQHCRFTSDCQTLIS
SAHDAVIQVWNWQLNECVFLRGHKEAIKDFRLLESAKLLSWSFDGTVKVWNIITGNTEKD
FACHGGAVLSCAVSPDGRKFSSTSADKTAKIWSFESSCVLHELKGHEACVRCCTFSPNNK
LLATGDDKGDIRIWDILTGGLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSEMLVSSGGYL
KWWNVTTGESLQTFYTNGTNLKSIHVSPDFKVYVTVDNLGILYVLQKL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagagtagaaattatttactcatgaatcgtcaagcactggagagagacatc
aagacctcttacattatggatcatatggtaactgaccaagtactaacgttacaggaggaa
gagaaagtgaaacagcagaacacacagaaggagcgagcagctatgctaataaacattatt
cttgaaaaagataataattcatatagatccttttataatgcactgcttcatgaagggtac
agagatcttgctgcacttcttcaggatggcattcctgtcttctcctctggtaatggaaag
agttctctggatggaatgacttcttatgttaagagaattctctgtgaaggaggagtacca
caaagaccggttgtgtttgtcactcggccaaaactggtagatgctattaaacagaaactg
tactgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggctgcggaaag
actgttttaacagcagaagctttaagggatcaccagctcttggaagattattttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctccttataaaactacaa
aatctctgtagtagattagaacatgactctactctttcacagcgaccaccgcttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccaggtctcttttg
gtcctggatgacatctgggattcttgggtattaaaagcatttgataatcaatgtcaagtt
cttatcaccagcagggacaggagtgtaacagacgctgtgtctggcaataaatatgagatt
catgtagaaagtggacttgcacatgagaaaggactggaggttttatccctttttgtgaat
atgaaaatatcagaactgccagaacaggctaactgcattataagagaatgcaaaggttct
cctcttgtgatatccttgataggtgcattattacgggacttccccagtcgctgggagtac
tatctcaaacagctgcagaacaagcaatttaaaagaataagaaaatcttcgtcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactggataatgattttaaa
gactactataaagacctctctattcttccaaaagatgttaaagtacctactaaggtgctc
tgtattctttgggatatggaaaccgaagaagttgaagatatactgcagaaatttgttaac
aaatcactattgttctgtgatcgtaatgggaagtcatttcattattatttacatgatctt
cagcttgactttcttacagagaagaatcgcaaccagcttcaggagctacacaaaaacata
gtcaatcagtacaagaaatactacaagcttaacatgcctattccatctcaagaggattgc
atgtactggtataacttcctagcatatcacatggctggtgccaacatgcagaaggaactc
cgtgagcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtggaatatagttcagtcctggatcaaaaggatagcatagca
cgtgagaatttccaggaatttctgtctttaaatgggcaccttcttggacgacagccattt
cctgacattatacagctgggtctttgtcaaccagagacatcagaggtatatcaacaagcc
aagctacgtgctcagagtgaaacaggagcattttatttggaatggataaataaaaaatct
ttgaaaaacctctcccgtctggttgttcgtccgcatagagatgcggtttaccatgcctgc
ttttctcaggacagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaaacagaaagtggagagatgctgctggaaataactgctcatgaagatgaaatactctgt
tgcgctttctctgcagatgataaatatgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggcaagtgtatgcacatatatgaagaacacacagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacgtgctcaaatgat
actttcatcaaactttgggatctgaagggaaagtattgtagaaatacgatgtttggtcat
gtaaattctgtcaatcactgtagattttcgccaaatgatgaatatgttgccagctgctca
acagatggaacagtaaagctttgggaagtgcgctcagcaaatgaactgaaaactattgag
ataaaagatttcttccaaaatgcagatgagcaagatgatgtggaggttttagtaaaatgt
tgctcttggtccagaaatagtgacatgattttggccgttgccaaaaataaacttttgctt
tttgatgttaaaacaagcaatttgttaacgcaagtcatcgtaagtcatcacagtacaatc
caatattgtgacttctgtgctggtgatgagttagtagcagttgctttgtctcattgttct
gttgagttatggaatattaaatccttatcaaaagtagcagattgcaggggacacatgagc
tgggttcactgtgtgacattttccccagatgggtctctgtttctgacatcctctgatgac
cagacaatacgaatttgggaaacgaacaaggtgtgcaagtcttctgatgctgtgctaaaa
agtgaactagacgctgtatttcacaatggtgaagtgatgattttagcaatttacaatcag
aagtatatacaactcattaatggaaatacagacaacattattatgcagacagaacctcag
gaatccctaatttgctgctgttgcttaagtgaagatctaaaatttgcagcatttggacag
gagaatggaacagtaaaggtattacagttgttggatgggaaagttctgaaataccgggag
gcttacaggacatccgtgcagcattgtcgatttacctctgattgtcagactctgatttca
agtgctcatgacgcagtcatacaggtatggaattggcagctgaacgaatgtgtctttcta
agagggcacaaggaagctatcaaggactttaggcttctggaaagtgcaaaacttctttct
tggtcatttgatggaacagttaaggtttggaatatcatcactggaaacacagaaaaagat
tttgcttgccatggaggtgctgttctttcctgtgctgtttcacctgatggtaggaagttt
tcatctacttctgctgacaaaactgcaaagatatggagctttgaaagttcatgtgttctt
catgagctgaaaggtcatgaagcctgtgtgcggtgctgtactttctctcctaataacaaa
ttactagccactggggatgacaaaggagatataaggatttgggacattttaacaggtggg
ttacttcacttctgctccccagtcactgtagatgaaggagaaccaacacacggtggctgg
gtaaccgacctctcgttttcacctgacagtgagatgcttgtgtcatctggaggctatctt
aagtggtggaatgtaactactggagaatccttacaaacattctacacaaatggaactaac
cttaagtcgatacatgtgtcccctgatttcaaagtgtacgtgactgttgataatcttggt
attctttatgtattacagaaattgtga
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