Anser cygnoides (swan goose): 106046927
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Entry
106046927 CDS
T04896
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acyg04040
]
106046927 (SCN4A)
Ion channels [BR:
acyg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106046927 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
CABIN1_M
Motif
Other DBs
NCBI-GeneID:
106046927
NCBI-ProteinID:
XP_013053635
LinkDB
All DBs
Position
22:2946647..2992919
Genome browser
AA seq
1840 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPESLAAIEQRIAEAEALKVKRQQVELPEEEELKPSSDLEAGKN
LPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKIVEYTFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLLGDFGLDNDTLAN
ATLYGNLTDSIDSNFTSNNTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPEGYEC
MKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGS
FYLINLILAVVAMAYAEQNDATMLEAQQKEEEFQQLMEQLKKHQEEQEKQLQDRRSSSGS
LRSSTAEKKSDSDLNSDQDKAKDCNGRVVPKVVLERSATVIEFNPGNEAEKSNHNHLTVG
NQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLIWDCCLPWLKLKEFVK
LVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIAL
DPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKI
IGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCTLPRWHMHDFFHSFL
IVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSLAA
SDDDGEMNNLQIAIGRITRGIDFVKSSVLMLLRRLWKGKKVAPEEEQEPSKGDNSALNHV
DTGQEPKSENMDGVTGKEYLFMDELDHMNFINNPNLTVQVPIASEESDLYEEETSTQSDT
EDAKVRKNPLSSDNASSLCSTVDYKPPPPEEEAEAEEAEDSSEPEECFTEACVKRFPCLY
VDITSERGKVWWNVRKTCFRIVEHDWFETFIVFMILLSSGALAFEDVYIEQRRVIRTILE
YADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCINTTSGELFEISVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLN
MVTMMVETDDQSQLKTDILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SIAGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPELENPGSSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATE
ESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALRGDAPEKEGLIATKMHEMYGNSG
TDLETAPAFSLTPVPSSETQDAPGEMKVWDGKRVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccctgagaacctccgccccttcacccccgagtca
ctggctgccatcgagcagcgcatcgccgaggcagaggcactcaaggtaaagcggcagcag
gtggagctgcccgaggaagaggagctcaagcccagcagtgacctggaagccggcaagaac
ctgcccctcatctatggtgacccccccgtggagctcatcgggacacccctggaggacctg
gaccctttctacaaggataagaagactttcatagtcctcaacaaagggaagtctatcttc
cgcttctcggcgactcctgccctctacctgctgggtcccttccaccccatccggagagga
gccatcaaagtgctcatccattcattattcagcatgttcatcatgatcacgattttaacc
aactgcgtgtttatgacattgagcaacccgccagcgtggtccaagattgtggaatacacc
ttcactggaatatacacctttgagtccctcataaagatactgtcaagaggcttctgcatc
gatgactttacattcctgcgtgacccgtggaattggctggacttcatggtcatctccatg
gcctacatcaccgagttcgtggacctggggaacatatctgctctcaggaccttccgcgtc
ctccgtgccttgaaaaccatcacagtgataccagggctgaagacaatcgttggggcgctc
atccagtcggtgaagaagctctcagatgtcatgatcctcaccgtcttctgcctgagtgtc
tttgccctcattggcctccagctcttcatgggaaacctccggcacaagtgcgtgcggtgg
ccccccctcaatgacaccctgctgggggacttcgggctggacaacgacacattggccaat
gcaacgctctatggcaacctcaccgacagcattgacagcaacttcaccagcaacaacacc
tttgattttgaggcctacatcaacgatgaagcaaatttctactttctggagggagcgctc
gatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgagggatacgagtgc
atgaaggcggggaggaaccccaactacggctacaccagctacgacaccttcagctgggct
ttcctggcgctgttccgcctcatgacgcaggacttttgggagaacctcttccagctgacc
ctgcgtgcagcagggaagacatacatgatcttcttcgtggtggttatattcctgggttcc
ttctacctcatcaacctcatcctggcggtggtggccatggcctacgcagaacaaaatgat
gccacgatgctggaggcacagcagaaggaggaggaatttcagcagctcatggagcagctg
aagaagcaccaggaggagcaagagaagcagttgcaggacaggcggtccagcagcggctcc
ctgcgcagcagcacggccgagaagaagagtgactcggacctgaacagtgaccaggacaag
gcgaaggactgcaacgggcgagtggtccccaaggtggtgctggagcggtctgccacggtg
attgaattcaacccaggcaacgaggcagagaaatcaaaccacaaccacctcaccgtgggc
aaccaagacgggcctggccttgagaagagagtggggagtgccatcagtgtcatctccaac
gccgtggaagagctggaggaggctcaccagaagtgcccgccttggtggtacaaatttgct
cacacgttcctgatctgggactgctgccttccatggctgaagctgaaggagtttgtcaag
ctggtggtgatggacccctttgtggacctgggcatcaccatctgcatcgtgctcaacacg
ctcttcatggccatggagcactaccccatgacagaggagtttgagaatgtgctgactgtg
gggaacctggtctttacagggatcttcacggcagagatggtcctgaagctcattgcgttg
gacccgtacgagtatttccagcagggctggaacatatttgacagcatcatcgtcaccctg
agcctggtggagctgggtctggccaacgtgcaggggctctccgtgctccgctccttccgc
ttgctgagggttttcaaactcgccaagtcctggcccaccctcaacatgctcatcaagatc
atcggcaactcagtgggtgctctggggaacctcaccctggtgttggccatcatcgtcttc
atcttcgccgtggtggggatgcagctcttcgggaagagctacatggagtgcgtgtgcaag
atctccctggactgcacactgccccgctggcacatgcatgacttcttccactccttcctc
atcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccagaccatgtgcctcatcgtcttcatgatggtcatggtcatcgggaacctcgtg
gtgctgaacctgttcttagctttgctgctgagctccttcagtgccgacagcctggcagcg
tcagacgatgacggcgagatgaacaacttgcagattgctatcggcagaatcaccaggggg
atcgacttcgtaaagagctctgtcctcatgctgctccgcaggctgtggaaggggaagaag
gtggccccagaggaagagcaggagcccagcaagggggacaactctgcactgaaccacgtg
gacactggccaggagcccaagtcggagaacatggatggagtcactgggaaggagtatttg
ttcatggacgaactggaccacatgaatttcattaacaaccccaacctgacggtgcaggtc
cccattgcctcggaggagtccgacctctatgaggaggagacgagcacccagtctgacacc
gaggatgccaaggtgagaaagaaccccctctccagcgacaatgcctcgtctctgtgcagc
accgtggattacaagccgccaccgccggaggaggaggcggaggcagaagaggctgaggac
agcagcgagcctgaggagtgcttcaccgaagcttgcgtgaagaggtttccctgcctctac
gtggacatcaccagcgagagagggaaggtctggtggaacgtccggaaaacctgcttccgc
atcgttgagcatgactggttcgagaccttcatcgtcttcatgatcctcctcagcagcggg
gcgctggcttttgaggacgtctacattgaacagcgacgggtgatacgcaccatcctggag
tacgctgacaaagtcttctcctacgtcttcgtcatcgagatgttgctcaagtgggtggcc
tacggcttcaaggtttacttcaccaacgcgtggtgctggctggatttcctcatcgtcgat
gtttctattatcagcctgacagcaaactggctgggatactccgagctgggagccatcaag
tccctgcggacactgagggccctgagaccgctgcgcgccctgtccagatttgaagggatg
cgggtggtggtgaacgccttgctgggcgccatcccctccatcatgaacgttctgctggtc
tgcctcatcttctggctgatattcagcatcatgggggtgaacctctttgcggggaagtac
taccgatgcataaacaccacctcgggggaactctttgaaatcagtgtggtgaacaataag
agtgactgcatggctctcctccacaccaacgaggtcagatgggtcaatgtcaaggtcaac
ttcgacaacgtgggcttgggatacctgtccttgctgcaggtggcaaccttcaaaggctgg
atggacatcatgtatgccgccgtggactcgcgtgagattgaagaacagccatcgtacgag
atcaacctgtacatgtacatctacttcgtcatcttcatcatctttggtgccttttttacc
ctgaacctcttcatcggtgtcatcattgacaacttcaaccagcagaagaaaaagtttgga
ggtaaagacatcttcatgacggaagagcagaagaaatactataacgccatgaagaagctt
ggctccaagaaaccccagaagcccatccccaggccctcgaacaagtttcaagggatggtg
tttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaac
atggtgaccatgatggtcgaaacagatgatcaaagccagctcaaaacagacatcctctac
aaaatcaacctggtcttcatcgtcatcttcactggagagtgtgtgctaaaaatgttcgcc
ttgcgctactactacttcactatcggctggaacatatttgactttgtggtggtcatcctc
tccattgcaggtattgtcctctcagacatcatagagaagtacttcgtatcacccacgctc
ttcagggtcatcaggctggcgaggattggccgtgtcctccggctgatccgaggagcaaaa
ggcatccggactctcctgtttgctctgatgatgtccctgcctgccctcttcaacatcggc
ctcctgctgttcctcgtcatgttcatctactccatctttgggatgtccaacttcgcctac
gtaaagaaagaggcagggatcgatgacatcttcaactttgaaacttttgggaacagcatc
atctgcctcttccagatcaccacatcggccggatgggatggtctgctcagccccatcctc
aacagcggcccccccgactgcgaccccgaactggagaaccctggcagttcagtaaaaggg
aactgcggcaatccatccatcggcatcttcttcttctgcagctacatcatcatttccttt
cttattgtggtgaacatgtacattgccatcatcctggagaatttcaatgtggccacggag
gagagcagcgagccactctgtgaagatgattttgaaatgttttatgaaacatgggagaag
tttgacccggatgccacccagttcatcgcgtacagcaccttgtctgacttcgtggacact
ttgcaggagccgctcaaaattcctaaaccaaacaagatcaagctgatcactatggatcta
ccgatggttgctggggacaaaatccactgtctggatatcctctttgccctgacaaaggaa
gtgctgggagactcgggagagatggatgctttgaaggccaccatggaggagaagttcatg
gccgcgaacccctcaaaggtttcctacgaacccatcaccaccactctgaaaaggaagcac
gaggaagtgtgtgctacaaaaatccaaagggctttccggaggtacctcctgaggcgctca
gtgaagcaggcctcctacatgtacaggcacagtaaggacgaagacgccctgagaggggac
gcgcccgagaaggaaggtctgatcgcaaccaaaatgcatgagatgtacgggaacagtggg
acagacttggagacagccccagccttcagccttacacctgtgccaagctcagagactcaa
gatgctcccggtgaaatgaaagtgtgggatgggaaacgcgttgtgaaggagtcgcttgtg
taa
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